RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 KCNK16Q96T55 309 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 SMOQ99835 787 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 AGPAT1Q99943 283 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 HAUS4Q9H6D7 363 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 CLDND1Q9NY35 253 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 EHD2Q9NZN4 543 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 ASB3Q9Y575 518 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 LINC01565O15544 149 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 XYLBO75191 536 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 SOAT2O75908 522 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 BEST1O76090 585 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 MMEP08473 750 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 ATF6P18850 670 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 PLA2G4AP47712 749 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 CDK17Q00537 523 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 FMO1Q01740 532 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 PDE4CQ08493 712 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 GOLGA8FQ08AF8 430 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 GOLGA8DPQ0D2H9 430 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 DDR2Q16832 855 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 HGSNATQ68CP4 663 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 ANKRD54Q6NXT1 300 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 CYP26C1Q6V0L0 522 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 TMEM35BQ8NCS4 154 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 ZMIZ2Q8NF64 920 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 CMASQ8NFW8 434 aaPredicted RBP16.07■□□□□ 0.16
SNIP1-202ENST00000468040 STK32AQ8WU08 396 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 SLC35F5Q8WV83 523 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 PANX2Q96RD6 677 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 TMEM30AQ9NV96 361 aa16.07■□□□□ 0.16
SNIP1-202ENST00000468040 CCDC195A0A1B0GUA6 201 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 RFPL2O75678 378 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 PAPLNO95428 1278 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 CFHP08603 1231 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 CSH1P0DML2 217 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 CSH2P0DML3 217 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 SKILP12757 684 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 CHRNB2P17787 502 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 TNFAIP3P21580 790 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 SSTR3P32745 418 aaPredicted RBP16.06■□□□□ 0.16
SNIP1-202ENST00000468040 CDH5P33151 784 aaPredicted RBP16.06■□□□□ 0.16
SNIP1-202ENST00000468040 GPD2P43304 727 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 GPR15P49685 360 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 TAF12Q16514 161 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 DENND5BQ6ZUT9 1274 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 PIGZQ86VD9 579 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 PASD1Q8IV76 773 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 NUP93Q8N1F7 819 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 PSMG2Q969U7 264 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 HSFY1Q96LI6 401 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 ZNF512Q96ME7 567 aaPredicted RBP16.06■□□□□ 0.16
SNIP1-202ENST00000468040 SYT11Q9BT88 431 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 PRKD2Q9BZL6 878 aa16.06■□□□□ 0.16
SNIP1-202ENST00000468040 SEPT11Q9NVA2 429 aaKnown RBP16.06■□□□□ 0.16
SNIP1-202ENST00000468040 SSU72P8A0A1W2PR75 194 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 CCL16O15467 120 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 TBX10O75333 385 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 RTN3O95197 1032 aaPredicted RBP16.05■□□□□ 0.16
SNIP1-202ENST00000468040 SLC5A3P53794 718 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 SNX16P57768 344 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 PDCLQ13371 301 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 SKIV2LQ15477 1246 aaKnown RBP16.05■□□□□ 0.16
SNIP1-202ENST00000468040 CCDC85BQ15834 202 aaPredicted RBP16.05■□□□□ 0.16
SNIP1-202ENST00000468040 SDHAF4Q5VUM1 108 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 PPP1R2P3Q6NXS1 205 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 WDR59Q6PJI9 974 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 EP400NLQ6ZTU2 488 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 ZNF571Q7Z3V5 609 aaPredicted RBP16.05■□□□□ 0.16
SNIP1-202ENST00000468040 MSANTD4Q8NCY6 345 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 C1orf131Q8NDD1 294 aaKnown RBP16.05■□□□□ 0.16
SNIP1-202ENST00000468040 GIPC2Q8TF65 315 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 KCTD13Q8WZ19 329 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 FBXO44Q9H4M3 255 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 LRRC4Q9HBW1 653 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 CYLDQ9NQC7 956 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 COMMD8Q9NX08 183 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 CLEC1BQ9P126 229 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 ARHGAP20Q9P2F6 1191 aa16.05■□□□□ 0.16
SNIP1-202ENST00000468040 MYH10P35580 1976 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 PATJQ8NI35 1801 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 SLC38A8A6NNN8 435 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 HHLA1C9JL84 531 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 TULP2O00295 520 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 TNFRSF10BO14763 440 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 CYP1A1P04798 512 aaPredicted RBP16.04■□□□□ 0.16
SNIP1-202ENST00000468040 ACADSBP45954 432 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 NOMO3P69849 1222 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 ITIH3Q06033 890 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
SNIP1-202ENST00000468040 NAA35Q5VZE5 725 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 CES5AQ6NT32 575 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 SYCE2Q6PIF2 218 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 TMC5Q6UXY8 1006 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 DNAJB7Q7Z6W7 309 aaPredicted RBP16.04■□□□□ 0.16
SNIP1-202ENST00000468040 LEMD2Q8NC56 503 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 GPR152Q8TDT2 470 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 IPO4Q8TEX9 1081 aaKnown RBP16.04■□□□□ 0.16
SNIP1-202ENST00000468040 TRMT2BQ96GJ1 504 aaKnown RBP16.04■□□□□ 0.16
SNIP1-202ENST00000468040 MIS12Q9H081 205 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 DEF6Q9H4E7 631 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms