RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 MED15Q96RN5 788 aa16.12■□□□□ 0.17
ATG4B-215ENST00000468018 CLSTN2Q9H4D0 955 aa16.12■□□□□ 0.17
ATG4B-215ENST00000468018 BRD9Q9H8M2 597 aa16.12■□□□□ 0.17
ATG4B-215ENST00000468018 CSNK1G1Q9HCP0 422 aa16.12■□□□□ 0.17
ATG4B-215ENST00000468018 CTNND2Q9UQB3 1225 aa16.12■□□□□ 0.17
ATG4B-215ENST00000468018 KANSL1LA0AUZ9 987 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 FAM92AA1XBS5 289 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 TNFRSF10BO14763 440 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 GALR2O43603 387 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-215ENST00000468018 ANXA13P27216 316 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 GDI1P31150 447 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 PLA2G5P39877 138 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 CAMK4Q16566 473 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 DCAF17Q5H9S7 520 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-215ENST00000468018 KLHL10Q6JEL2 608 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 CCDC105Q8IYK2 499 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 CELF5Q8N6W0 485 aaKnown RBP16.11■□□□□ 0.17
ATG4B-215ENST00000468018 C12orf29Q8N999 325 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 PJA1Q8NG27 643 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 RIN3Q8TB24 985 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 BPIFB1Q8TDL5 484 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 USP13Q92995 863 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-215ENST00000468018 KCNK16Q96T55 309 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 NT5C1AQ9BXI3 368 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 OSBPL6Q9BZF3 934 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.11■□□□□ 0.172e-6■■■■■ 96.1
ATG4B-215ENST00000468018 HEBP1Q9NRV9 189 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 CCL26Q9Y258 94 aa16.11■□□□□ 0.17
ATG4B-215ENST00000468018 ZNF263O14978 683 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 OLFM2O95897 454 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 CCDC130P13994 396 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 TCF3P15923 654 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 PFKLP17858 780 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 FMO5P49326 533 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 ORC1Q13415 861 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 FZD5Q13467 585 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 TCERG1LQ5VWI1 586 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 TRIM59Q8IWR1 403 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 UBR7Q8N806 425 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 CCDC150Q8NCX0 1101 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 LMO3Q8TAP4 145 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 SLC2A14Q8TDB8 520 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 TATDN2Q93075 761 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 SLC22A12Q96S37 553 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 HNRNPABQ99729 332 aaKnown RBP16.1■□□□□ 0.17
ATG4B-215ENST00000468018 SMOQ99835 787 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 FOXQ1Q9C009 403 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 KIF9Q9HAQ2 790 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 LTB4R2Q9NPC1 389 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 DMAP1Q9NPF5 467 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-215ENST00000468018 EHD2Q9NZN4 543 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 ATP8B3O60423 1300 aa16.1■□□□□ 0.17
ATG4B-215ENST00000468018 ZNF840PA6NDX5 716 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 P4HA2O15460 535 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 BEST1O76090 585 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 CLSTN1O94985 981 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 GNA14O95837 355 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 GLULP15104 373 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 AVPR1AP37288 418 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 PPP3CCP48454 512 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 PTPN5P54829 565 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 STX17P56962 302 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 ARHGAP29Q52LW3 1261 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 TPRG1Q6ZUI0 275 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 GPIHBP1Q8IV16 184 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 NUP93Q8N1F7 819 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 TTC39CQ8N584 583 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 OVCA2Q8WZ82 227 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 IPO9Q96P70 1041 aaKnown RBP16.09■□□□□ 0.17
ATG4B-215ENST00000468018 ARID3AQ99856 593 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 FAM83CQ9BQN1 747 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 SMG9Q9H0W8 520 aaKnown RBP16.09■□□□□ 0.17
ATG4B-215ENST00000468018 KRT82Q9NSB4 513 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 TDP1Q9NUW8 608 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 COMMD8Q9NX08 183 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 RWDD2AQ9UIY3 292 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 MYOFQ9NZM1 2061 aa16.09■□□□□ 0.17
ATG4B-215ENST00000468018 C2orf78A6NCI8 922 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 HHLA1C9JL84 531 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 DPYSL4O14531 572 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 AP1G2O75843 785 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 RTN3O95197 1032 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-215ENST00000468018 OAS1P00973 400 aaKnown RBP16.08■□□□□ 0.16
ATG4B-215ENST00000468018 ZDHHC11BP0C7U3 371 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 TARSP26639 723 aaKnown RBP16.08■□□□□ 0.16
ATG4B-215ENST00000468018 SLC5A3P53794 718 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 PLCB2Q00722 1185 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 NHLH1Q02575 133 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 TAF10Q12962 218 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 USP4Q13107 963 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 ZNF77Q15935 545 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 SNX30Q5VWJ9 437 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 CLEC20AQ6ZU45 233 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 CLDN23Q96B33 292 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 CYFIP2Q96F07 1278 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 MSANTD3Q96H12 275 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 SRRTQ9BXP5 876 aaKnown RBP16.08■□□□□ 0.16
ATG4B-215ENST00000468018 PNPLA8Q9NP80 782 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 CISHQ9NSE2 258 aa16.08■□□□□ 0.16
ATG4B-215ENST00000468018 FAM49BQ9NUQ9 324 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms