RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 SMAP1Q8IYB5 467 aaPredicted RBP5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 CACNA2D3Q8IZS8 1091 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 CPXCR1Q8N123 301 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 LENG9Q96B70 501 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 PAGR1Q9BTK6 254 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 PCDHAC1Q9H158 963 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 ZNF768Q9H5H4 540 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 UNKLQ9H9P5 680 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 DNAJB11Q9UBS4 358 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 HPSEQ9Y251 543 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 FOXD2O60548 495 aaPredicted RBP5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 CCNT2O60583 730 aaKnown RBP5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 SRGAP2O75044 1071 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 ZFPL1O95159 310 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 GATA3P23771 443 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 EPHA3P29320 983 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 ATICP31939 592 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 PPM1FP49593 454 aaPredicted RBP5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 BCAT1P54687 386 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 NXPH1P58417 271 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 EFEMP1Q12805 493 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 TRIM71Q2Q1W2 868 aaKnown RBP5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 SPATS1Q496A3 300 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 RNF207Q6ZRF8 634 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 RFX8Q6ZV50 586 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 ARHGEF19Q8IW93 802 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 CCDC28AQ8IWP9 274 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 TRAPPC12Q8WVT3 735 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 EXTL1Q92935 676 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 EID2BQ96D98 161 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 C18orf8Q96DM3 657 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 TPSD1Q9BZJ3 242 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 AMBRA1Q9C0C7 1298 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 SLC25A32Q9H2D1 315 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 OBP2BQ9NPH6 170 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 HELLSQ9NRZ9 838 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 DACT1Q9NYF0 836 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 ZMYND8Q9ULU4 1186 aaPredicted RBP5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 TBC1D30Q9Y2I9 924 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 MAP3K2Q9Y2U5 619 aa5.95□□□□□ -1.46
GAPVD1-211ENST00000467707 OR2W5A6NFC9 320 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 LGALS16A8MUM7 142 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 hCG_1984214I3L0E3 225 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 PROM1O43490 865 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 PIP5K1CO60331 668 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 SNX2O60749 519 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 CSF1RP07333 972 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 ITGA5P08648 1049 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 HSD3B1P14060 373 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 ZNF20P17024 532 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 MST1P26927 711 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 SERPINF1P36955 418 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 SLC25A3Q00325 362 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 GALNT1Q10472 559 aaPredicted RBP5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 FZD5Q13467 585 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 NRN1LQ496H8 165 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 VPS53Q5VIR6 699 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 MANEALQ5VSG8 457 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 GGT6Q6P531 493 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 KCTD20Q7Z5Y7 419 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 DTX2Q86UW9 622 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 PALM2Q8IXS6 379 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 LNX2Q8N448 690 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 MYCT1Q8N699 235 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 B3GALNT2Q8NCR0 500 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 DNAJB14Q8TBM8 379 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 ABHD5Q8WTS1 349 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 OSCP1Q8WVF1 389 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 HAS1Q92839 578 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 ADAM2Q99965 735 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 TMEM120AQ9BXJ8 343 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 INO80BQ9C086 356 aaPredicted RBP5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 TRIM36Q9NQ86 728 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 SSX2IPQ9Y2D8 614 aa5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 MRPS17Q9Y2R5 130 aaKnown RBP5.94□□□□□ -1.46
GAPVD1-211ENST00000467707 ACKR2O00590 384 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 VIPP01282 170 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 NPPBP16860 134 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 ITGA8P53708 1063 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 ADAM17P78536 824 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 TIAL1Q01085 375 aaKnown RBP eCLIP5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 BIRC3Q13489 604 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 ATP1A4Q13733 1029 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 SPDYAQ5MJ70 313 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 ABHD17BQ5VST6 288 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 ZNF354CQ86Y25 554 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 ATG16L2Q8NAA4 619 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 MBD3L2Q8NHZ7 208 aaPredicted RBP5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 CACTINQ8WUQ7 758 aaKnown RBP5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 RSC1A1Q92681 617 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 PTCD3Q96EY7 689 aaKnown RBP5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 PLEKHG4BQ96PX9 1271 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 NUDT22Q9BRQ3 303 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 ALG8Q9BVK2 526 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 ACTRT3Q9BYD9 372 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 KRTAP3-1Q9BYR8 98 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 GBA2Q9HCG7 927 aaPredicted RBP5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 LUZP4Q9P127 313 aa5.93□□□□□ -1.46
GAPVD1-211ENST00000467707 LRFN1Q9P244 771 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms