RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 XKR4Q5GH76 650 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 CDCA2Q69YH5 1023 aaPredicted RBP13.68□□□□□ -0.22
UBR4-210ENST00000466969 OVOS1Q6IE37 1185 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 ALKAL1Q6UXT8 129 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 DCBLD1Q8N8Z6 715 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 ETNPPLQ8TBG4 499 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 C18orf25Q96B23 403 aaPredicted RBP13.68□□□□□ -0.22
UBR4-210ENST00000466969 ERLEC1Q96DZ1 483 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 ZMAT2Q96NC0 199 aaKnown RBP13.68□□□□□ -0.22
UBR4-210ENST00000466969 CYP2S1Q96SQ9 504 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 WSB2Q9NYS7 404 aaPredicted RBP13.68□□□□□ -0.22
UBR4-210ENST00000466969 ANKRD6Q9Y2G4 727 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 METTL12A8MUP2 240 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 H0Y8X5 98 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 TDP2O95551 362 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 MPOP05164 745 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 ATP2B1P20020 1258 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 TNFRSF8P28908 595 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 OSTNP61366 133 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 GABREP78334 506 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 FOXK1P85037 733 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 FUT2Q10981 343 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 ILKQ13418 452 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 DHCR24Q15392 516 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 RTN1Q16799 776 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 SLC39A12Q504Y0 691 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 DSTYKQ6XUX3 929 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 CCDC97Q96F63 343 aaPredicted RBP13.67□□□□□ -0.22
UBR4-210ENST00000466969 MMS19Q96T76 1030 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 ZNF768Q9H5H4 540 aaKnown RBP13.67□□□□□ -0.22
UBR4-210ENST00000466969 THSD1Q9NS62 852 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 RGL1Q9NZL6 768 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 SSUH2Q9Y2M2 353 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 TMEM131Q92545 1883 aa13.67□□□□□ -0.22
UBR4-210ENST00000466969 STK36Q9NRP7 1315 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 CENPEQ02224 2701 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 PAPSS1O43252 624 aaPredicted RBP13.66□□□□□ -0.22
UBR4-210ENST00000466969 DFNA5O60443 496 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 PPFIA2O75334 1257 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 DXOO77932 396 aaKnown RBP13.66□□□□□ -0.22
UBR4-210ENST00000466969 CSH1P0DML2 217 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 CSH2P0DML3 217 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 KCNE1P15382 129 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 HMGA1P17096 107 aaKnown RBP13.66□□□□□ -0.22
UBR4-210ENST00000466969 FOSBP53539 338 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 CTTNQ14247 550 aaKnown RBP13.66□□□□□ -0.22
UBR4-210ENST00000466969 EPHA7Q15375 998 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 IGFBP7Q16270 282 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 PADI6Q6TGC4 694 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 CHPFQ8IZ52 775 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 TBCKQ8TEA7 893 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 SNX19Q92543 992 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 DYDC2Q96IM9 177 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 VCPIP1Q96JH7 1222 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 MRGPRX1Q96LB2 322 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 DRC1Q96MC2 740 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 NACC1Q96RE7 527 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 SLC22A12Q96S37 553 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 SEMA3CQ99985 751 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 SLC6A17Q9H1V8 727 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 IL25Q9H293 177 aa13.66□□□□□ -0.22
UBR4-210ENST00000466969 UXTQ9UBK9 157 aaPredicted RBP13.66□□□□□ -0.22
UBR4-210ENST00000466969 CYP3A7-CYP3A51PA0A087WV96 503 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 ADH1CP00326 375 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 TCF3P15923 654 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 CYP3A7P24462 503 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 GRM5P41594 1212 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 CDR1P51861 262 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 KCNB1Q14721 858 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 ATF7IP2Q5U623 682 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 MAEAQ7L5Y9 396 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 C12orf40Q86WS4 652 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 GATAD2AQ86YP4 633 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 TPH2Q8IWU9 490 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 ADGRG2Q8IZP9 1017 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 ARL14EPQ8N8R7 260 aaPredicted RBP13.65□□□□□ -0.22
UBR4-210ENST00000466969 CEP120Q8N960 986 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 RFFLQ8WZ73 363 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 TTC12Q9H892 705 aaPredicted RBP13.65□□□□□ -0.22
UBR4-210ENST00000466969 ADAMTS1Q9UHI8 967 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 OBSL1O75147 1896 aa13.65□□□□□ -0.22
UBR4-210ENST00000466969 FBN3Q75N90 2809 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 ITGAVP06756 1048 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 NFICP08651 508 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 FAM87AP0C7U9 286 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 GRIA4P48058 902 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 INSM1Q01101 510 aaPredicted RBP13.64□□□□□ -0.23
UBR4-210ENST00000466969 ZSCAN23Q3MJ62 389 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 ARL13BQ3SXY8 428 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 ZC2HC1CQ53FD0 456 aaPredicted RBP13.64□□□□□ -0.23
UBR4-210ENST00000466969 C10orf76Q5T2E6 689 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 C20orf194Q5TEA3 1177 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 FILIP1Q7Z7B0 1213 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 C1orf216Q8TAB5 229 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 SPPL2BQ8TCT7 592 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 C2orf15Q8WU43 125 aaKnown RBP13.64□□□□□ -0.23
UBR4-210ENST00000466969 EXTL1Q92935 676 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 SLC4A5Q9BY07 1137 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 C22orf23Q9BZE7 217 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 CNTN3Q9P232 1028 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms