RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 EIF3DO15371 548 aaKnown RBP eCLIP9.21□□□□□ -0.94
DDR1-242ENST00000465966 MEFVO15553 781 aaPredicted RBP9.21□□□□□ -0.94
DDR1-242ENST00000465966 GCNT3O95395 438 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 PLS3P13797 630 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 SPINK2P20155 84 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 RDXP35241 583 aaKnown RBP9.21□□□□□ -0.94
DDR1-242ENST00000465966 GALK1P51570 392 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 DGKEP52429 567 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 LRRC63Q05C16 580 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 SPAG1Q07617 926 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 KCNA1Q09470 495 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 KCNJ12Q14500 433 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 DMC1Q14565 340 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 KRT31Q15323 416 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 TPD52L1Q16890 204 aaPredicted RBP9.21□□□□□ -0.94
DDR1-242ENST00000465966 ZC2HC1CQ53FD0 456 aaPredicted RBP9.21□□□□□ -0.94
DDR1-242ENST00000465966 TRIM68Q6AZZ1 485 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 FOXR2Q6PJQ5 311 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 ZC3H3Q8IXZ2 948 aaKnown RBP9.21□□□□□ -0.94
DDR1-242ENST00000465966 THEM5Q8N1Q8 247 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 CPA6Q8N4T0 437 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 CSGALNACT2Q8N6G5 542 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 TTC9BQ8N6N2 239 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 MAB21L3Q8N8X9 362 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 SPC24Q8NBT2 197 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 TSTD1Q8NFU3 115 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 RPLP0P6Q8NHW5 317 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 SPIRE2Q8WWL2 714 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 SENP8Q96LD8 212 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 CNOT6LQ96LI5 555 aaKnown RBP9.21□□□□□ -0.94
DDR1-242ENST00000465966 NAP1L5Q96NT1 182 aaPredicted RBP9.21□□□□□ -0.94
DDR1-242ENST00000465966 SCNM1Q9BWG6 230 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 STRA6Q9BX79 667 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 SRRTQ9BXP5 876 aaKnown RBP9.21□□□□□ -0.94
DDR1-242ENST00000465966 IKZF4Q9H2S9 585 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 SLC32A1Q9H598 525 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 THAP9Q9H5L6 903 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 RPF1Q9H9Y2 349 aaKnown RBP9.21□□□□□ -0.94
DDR1-242ENST00000465966 HPS4Q9NQG7 708 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 TDP1Q9NUW8 608 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 TAB2Q9NYJ8 693 aa9.21□□□□□ -0.94
DDR1-242ENST00000465966 LIMA1Q9UHB6 759 aaKnown RBP9.21□□□□□ -0.94
DDR1-242ENST00000465966 CHD6Q8TD26 2715 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 COL4A2P08572 1712 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 CFAP47Q6ZTR5 3102 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 A0A1B0GTH6 734 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 TTC26A0AVF1 554 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 SRRM3A6NNA2 597 aaPredicted RBP9.2□□□□□ -0.94
DDR1-242ENST00000465966 LACTBL1A8MY62 500 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 CBFA2T2O43439 604 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 KIF20AO95235 890 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 SERPINC1P01008 464 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 MAPTP10636 758 aaKnown RBP9.2□□□□□ -0.94
DDR1-242ENST00000465966 NCKAP1LP55160 1127 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 LILRA4P59901 499 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 LMAN2Q12907 356 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 NR1H3Q13133 447 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 ZBTB6Q15916 424 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 UAP1L1Q3KQV9 507 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 TCP11X2Q5H9J9 407 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 CYP2U1Q7Z449 544 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 CD302Q8IX05 232 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 DCP1BQ8IZD4 617 aaKnown RBP9.2□□□□□ -0.94
DDR1-242ENST00000465966 TMEM161BQ8NDZ6 487 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 ZNF507Q8TCN5 953 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 SPPL2BQ8TCT7 592 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 GIPC2Q8TF65 315 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 NOC3LQ8WTT2 800 aaKnown RBP9.2□□□□□ -0.94
DDR1-242ENST00000465966 ZCCHC14Q8WYQ9 949 aaKnown RBP9.2□□□□□ -0.94
DDR1-242ENST00000465966 MRPS31Q92665 395 aaKnown RBP9.2□□□□□ -0.94
DDR1-242ENST00000465966 USP13Q92995 863 aaPredicted RBP9.2□□□□□ -0.94
DDR1-242ENST00000465966 CD101Q93033 1021 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 FAM212AQ96EL1 285 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 EEF2KMTQ96G04 330 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 TSG101Q99816 390 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 ZCWPW1Q9H0M4 648 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 IL21Q9HBE4 155 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 WASF3Q9UPY6 502 aa9.2□□□□□ -0.94
DDR1-242ENST00000465966 OTOL1A6NHN0 477 aaPredicted RBP9.19□□□□□ -0.94
DDR1-242ENST00000465966 TGFB1I1O43294 461 aa9.19□□□□□ -0.94
DDR1-242ENST00000465966 CYP11A1P05108 521 aa9.19□□□□□ -0.94
DDR1-242ENST00000465966 HAPLN1P10915 354 aaPredicted RBP9.19□□□□□ -0.94
DDR1-242ENST00000465966 HOXB3P14651 431 aaPredicted RBP9.19□□□□□ -0.94
DDR1-242ENST00000465966 ARSAP15289 507 aa9.19□□□□□ -0.94
DDR1-242ENST00000465966 ATF6P18850 670 aa9.19□□□□□ -0.94
DDR1-242ENST00000465966 CDK11BP21127 795 aaKnown RBP9.19□□□□□ -0.94
DDR1-242ENST00000465966 EEF1GP26641 437 aaKnown RBP9.19□□□□□ -0.94
DDR1-242ENST00000465966 GJA4P35212 333 aa9.19□□□□□ -0.94
DDR1-242ENST00000465966 DHPSP49366 369 aaPredicted RBP9.19□□□□□ -0.94
DDR1-242ENST00000465966 LIG4P49917 911 aa9.19□□□□□ -0.94
DDR1-242ENST00000465966 COPB1P53618 953 aaKnown RBP9.19□□□□□ -0.94
DDR1-242ENST00000465966 UBASH3AP57075 661 aa9.19□□□□□ -0.94
DDR1-242ENST00000465966 ZNF268Q14587 947 aaPredicted RBP9.19□□□□□ -0.94
DDR1-242ENST00000465966 KNOP1Q1ED39 458 aaKnown RBP9.19□□□□□ -0.94
DDR1-242ENST00000465966 PMS2CLQ68D20 193 aa9.19□□□□□ -0.94
DDR1-242ENST00000465966 ZNF720Q7Z2F6 126 aa9.19□□□□□ -0.94
DDR1-242ENST00000465966 VSTM4Q8IW00 320 aa9.19□□□□□ -0.94
DDR1-242ENST00000465966 OR10T2Q8NGX3 314 aa9.19□□□□□ -0.94
DDR1-242ENST00000465966 OSCP1Q8WVF1 389 aa9.19□□□□□ -0.94
DDR1-242ENST00000465966 GATA6Q92908 595 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms