RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 NUP58Q9BVL2 599 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 RBSNQ9H1K0 784 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 CEP72Q9P209 647 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 OTOGLQ3ZCN5 2332 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 MOSPD3O75425 235 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 TPM1P09493 284 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 WARSP23381 471 aaKnown RBP18.55■□□□□ 0.56
CPSF4-209ENST00000465132 PON1P27169 355 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 GNL1P36915 607 aaPredicted RBP18.55■□□□□ 0.56
CPSF4-209ENST00000465132 TSPY1Q01534 308 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 TWF1Q12792 350 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 CUL2Q13617 745 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 NR1I3Q14994 352 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 RNF19BQ6ZMZ0 732 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 DCP1BQ8IZD4 617 aaKnown RBP18.55■□□□□ 0.56
CPSF4-209ENST00000465132 TMEM130Q8N3G9 435 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 ZBTB44Q8NCP5 570 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 ATRIPQ8WXE1 791 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 NELL1Q92832 810 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 SEMA4DQ92854 862 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 SMARCD2Q92925 531 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 ZSWIM3Q96MP5 696 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 TRMT61BQ9BVS5 477 aaKnown RBP18.55■□□□□ 0.56
CPSF4-209ENST00000465132 TRIM5Q9C035 493 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 BRD9Q9H8M2 597 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 ZSCAN32Q9NX65 697 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 IFNKQ9P0W0 207 aa18.55■□□□□ 0.56
CPSF4-209ENST00000465132 PATJQ8NI35 1801 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 GOLGA6L3A6NEY3 463 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 CPB1P15086 417 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 EPHA5P54756 1037 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 SYCP1Q15431 976 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 SOWAHAQ2M3V2 549 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 APTXQ7Z2E3 356 aaKnown RBP18.54■□□□□ 0.56
CPSF4-209ENST00000465132 LIMS2Q7Z4I7 341 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 ZNF687Q8N1G0 1237 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 PDCL2Q8N4E4 241 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 LEMD2Q8NC56 503 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 OR6B3Q8NGW1 331 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 LMO3Q8TAP4 145 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 IRF7Q92985 503 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 ACBD6Q9BR61 282 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 PI4K2AQ9BTU6 479 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 PRMT8Q9NR22 394 aaPredicted RBP18.54■□□□□ 0.56
CPSF4-209ENST00000465132 ASAH2Q9NR71 780 aa18.54■□□□□ 0.56
CPSF4-209ENST00000465132 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.54■□□□□ 0.56
CPSF4-209ENST00000465132 MAN2B1O00754 1011 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 VNN2O95498 520 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 CCDC172P0C7W6 258 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 MYL4P12829 197 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 PSMC3P17980 439 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 SLC9A1P19634 815 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 ASPAP45381 313 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 LRMPQ12912 555 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 MTAPQ13126 283 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 WSCD1Q658N2 575 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 TSSK4Q6SA08 328 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 VITQ6UXI7 678 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 CACNA2D4Q7Z3S7 1137 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 GAS2L3Q86XJ1 694 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 ZNF397Q8NF99 534 aaPredicted RBP18.53■□□□□ 0.56
CPSF4-209ENST00000465132 FAM84AQ96KN4 292 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 LSM14BQ9BX40 385 aaKnown RBP18.53■□□□□ 0.56
CPSF4-209ENST00000465132 EDEM3Q9BZQ6 932 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 TRPV4Q9HBA0 871 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 UBE2TQ9NPD8 197 aaPredicted RBP18.53■□□□□ 0.56
CPSF4-209ENST00000465132 TRPV5Q9NQA5 729 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 CDH9Q9ULB4 789 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 KIAA1257Q9ULG3 409 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 L1RE1Q9UN81 338 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 CACNA1AO00555 2505 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 GPR179Q6PRD1 2367 aa18.53■□□□□ 0.56
CPSF4-209ENST00000465132 A8MXQ7 604 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 GABRDO14764 452 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 LILRB5O75023 590 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 GJA1P17302 382 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 GDI1P31150 447 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 VIPR2P41587 438 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 INCA1Q0VD86 236 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 TRIM14Q14142 442 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 PUM1Q14671 1186 aaKnown RBP eCLIP18.52■□□□□ 0.56
CPSF4-209ENST00000465132 NFE2Q16621 373 aaPredicted RBP18.52■□□□□ 0.56
CPSF4-209ENST00000465132 KLHDC7AQ5VTJ3 777 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 SPOPLQ6IQ16 392 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 SCARA5Q6ZMJ2 495 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 DGLUCYQ7Z3D6 616 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 ZSCAN18Q8TBC5 510 aaPredicted RBP18.52■□□□□ 0.56
CPSF4-209ENST00000465132 C2orf15Q8WU43 125 aaKnown RBP18.52■□□□□ 0.56
CPSF4-209ENST00000465132 DEPDC1BQ8WUY9 529 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 ANP32BQ92688 251 aaKnown RBP18.52■□□□□ 0.56
CPSF4-209ENST00000465132 NT5C1AQ9BXI3 368 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 NUCKS1Q9H1E3 243 aaKnown RBP18.52■□□□□ 0.56
CPSF4-209ENST00000465132 ZNF334Q9HCZ1 680 aaPredicted RBP18.52■□□□□ 0.56
CPSF4-209ENST00000465132 DDX43Q9NXZ2 648 aaKnown RBP18.52■□□□□ 0.56
CPSF4-209ENST00000465132 NCDNQ9UBB6 729 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 NDRG2Q9UN36 371 aaKnown RBP18.52■□□□□ 0.56
CPSF4-209ENST00000465132 YIPF1Q9Y548 306 aa18.52■□□□□ 0.56
CPSF4-209ENST00000465132 TIMM13Q9Y5L4 95 aaPredicted RBP18.52■□□□□ 0.56
CPSF4-209ENST00000465132 ATP8B3O60423 1300 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 OR4Q2P0C623 313 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms