RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 NUP93Q8N1F7 819 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 ZSWIM3Q96MP5 696 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 GCNAQ96QF7 691 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 SMOQ99835 787 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 KCNK12Q9HB15 430 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 CSNK1G1Q9HCP0 422 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 SIX2Q9NPC8 291 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 IGSF9Q9P2J2 1179 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 MUTYHQ9UIF7 546 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 GREB1Q4ZG55 1949 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 ANHXE9PGG2 379 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 ASGR2P07307 311 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 ATP1A3P13637 1013 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 CD19P15391 556 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 USP46P62068 366 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 ARHGAP44Q17R89 818 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 ARHGAP15Q53QZ3 475 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 FKBP15Q5T1M5 1219 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 CLEC20AQ6ZU45 233 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 TMEM150AQ86TG1 271 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 RBBP8NLQ8NC74 664 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 ZMIZ2Q8NF64 920 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 NXPE3Q969Y0 559 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 TTLL2Q9BWV7 592 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 DUSP16Q9BY84 665 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 SLITRK6Q9H5Y7 841 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 CBX8Q9HC52 389 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 CNTN6Q9UQ52 1028 aa15.37■□□□□ 0.05
SQSTM1-205ENST00000464493 TNFRSF10BO14763 440 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 RTN3O95197 1032 aaPredicted RBP15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 KRT5P13647 590 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 NPR3P17342 541 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 ZNF132P52740 706 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 PTPN21Q16825 1174 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 STXBP5Q5T5C0 1151 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 GPR158Q5T848 1215 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 KLHDC7AQ5VTJ3 777 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 DPY19L2P1Q6NXN4 242 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 PARM1Q6UWI2 310 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 MTSS1LQ765P7 747 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 APTXQ7Z2E3 356 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 ANKRD52Q8NB46 1076 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 ST13P5Q8NFI4 369 aaPredicted RBP15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 FGF14Q92915 247 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 KHSRPQ92945 711 aaKnown RBP eCLIP15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 LSM14BQ9BX40 385 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 TASP1Q9H6P5 420 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 COMMD8Q9NX08 183 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 DNAJC12Q9UKB3 198 aa15.36■□□□□ 0.05
SQSTM1-205ENST00000464493 DENND4CQ5VZ89 1909 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 ZNF638Q14966 1978 aaKnown RBP15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 LGALS16A8MUM7 142 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 ALADP13716 330 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 YWHAQP27348 245 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 SLC5A3P53794 718 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 SLC8A3P57103 927 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 CYP4F8P98187 520 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 UBXN1Q04323 297 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 IFRD2Q12894 506 aaPredicted RBP15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 HTR4Q13639 388 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 CNGA2Q16280 664 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 FAM78AQ5JUQ0 283 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 SMYD5Q6GMV2 418 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 LUZP1Q86V48 1076 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 SCAMP5Q8TAC9 235 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 ZSCAN18Q8TBC5 510 aaPredicted RBP15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 RSAD2Q8WXG1 361 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 TFAP2BQ92481 460 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 MRPS31Q92665 395 aaKnown RBP15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 SMARCD2Q92925 531 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 ASB16Q96NS5 453 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 PNPLA8Q9NP80 782 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 IL37Q9NZH6 218 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 HESX1Q9UBX0 185 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 ZMYM5Q9UJ78 669 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 TSPAN16Q9UKR8 245 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 SORCS3Q9UPU3 1222 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 NUMBLQ9Y6R0 609 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 TRIOO75962 3097 aa15.35■□□□□ 0.05
SQSTM1-205ENST00000464493 SOBPA7XYQ1 873 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 HHLA1C9JL84 531 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 PI4K2BG5E9Z4 385 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 O00370 1275 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 DCXO43602 365 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 TADA3O75528 432 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 DDX6P26196 483 aaKnown RBP eCLIP15.34■□□□□ 0.051e-6■□□□□ 10.6
SQSTM1-205ENST00000464493 USP8P40818 1118 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 PPP3CCP48454 512 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 TPM4P67936 248 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 TAF10Q12962 218 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 TDGQ13569 410 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 STILQ15468 1287 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 GOLGA7BQ2TAP0 167 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 TXNDC8Q6A555 127 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 TANGO2Q6ICL3 276 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 LCLAT1Q6UWP7 414 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 SLC44A3Q8N4M1 653 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 MAB21L3Q8N8X9 362 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 SHC3Q92529 594 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 ELSPBP1Q96BH3 223 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms