RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 SLC7A9P82251 487 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 ZXDBP98169 803 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 ZNF252P-AS1Q0IIN9 211 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 MYO1EQ12965 1108 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 CRY1Q16526 586 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 ANO7Q6IWH7 933 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 UNQ6494/PRO21346Q6UXR6 183 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 DENND5BQ6ZUT9 1274 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 SV2BQ7L1I2 683 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 CYP2U1Q7Z449 544 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 TTC16Q8NEE8 873 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 MDGA1Q8NFP4 955 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 OLIG1Q8TAK6 271 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 MYLPFQ96A32 169 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 TPSD1Q9BZJ3 242 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 CRTAC1Q9NQ79 661 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 INTS13Q9NVM9 706 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 EHD2Q9NZN4 543 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 TBC1D7Q9P0N9 293 aa18.49■□□□□ 0.55
HMGN1-209ENST00000463631 FBXO2Q9UK22 296 aaPredicted RBP18.49■□□□□ 0.55
HMGN1-209ENST00000463631 ANKRD11Q6UB99 2663 aaPredicted RBP18.48■□□□□ 0.55
HMGN1-209ENST00000463631 GIPC1O14908 333 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 CYP17A1P05093 508 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 CEACAM1P13688 526 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 BCKDHBP21953 392 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 TXLNAP40222 546 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 EIF2DP41214 584 aaKnown RBP18.48■□□□□ 0.55
HMGN1-209ENST00000463631 PPP3CCP48454 512 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 USP46P62068 366 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 NOP14P78316 857 aaKnown RBP18.48■□□□□ 0.55
HMGN1-209ENST00000463631 MRPS21P82921 87 aaKnown RBP18.48■□□□□ 0.55
HMGN1-209ENST00000463631 HSF5Q4G112 596 aaPredicted RBP18.48■□□□□ 0.55
HMGN1-209ENST00000463631 C2orf27AQ580R0 203 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 SH3PXD2AQ5TCZ1 1133 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 SYCP3Q8IZU3 236 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 GPD1LQ8N335 351 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 ANKRD36BP1Q96IX9 119 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 TRPM5Q9NZQ8 1165 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 MAGEC2Q9UBF1 373 aaPredicted RBP18.48■□□□□ 0.55
HMGN1-209ENST00000463631 EVLQ9UI08 416 aaPredicted RBP18.48■□□□□ 0.55
HMGN1-209ENST00000463631 SRPRBQ9Y5M8 271 aaKnown RBP18.48■□□□□ 0.55
HMGN1-209ENST00000463631 PTPRJQ12913 1337 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 DSPP15924 2871 aaKnown RBP18.48■□□□□ 0.55
HMGN1-209ENST00000463631 CACNA1EQ15878 2313 aa18.48■□□□□ 0.55
HMGN1-209ENST00000463631 GOLGA8IPA6NC78 632 aa18.47■□□□□ 0.55
HMGN1-209ENST00000463631 GOLGA8JA6NMD2 632 aa18.47■□□□□ 0.55
HMGN1-209ENST00000463631 LEFTY2O00292 366 aa18.47■□□□□ 0.55
HMGN1-209ENST00000463631 CDX4O14627 284 aaPredicted RBP18.47■□□□□ 0.55
HMGN1-209ENST00000463631 ATP2C2O75185 946 aa18.47■□□□□ 0.55
HMGN1-209ENST00000463631 PSMC1P62191 440 aaKnown RBP18.47■□□□□ 0.55
HMGN1-209ENST00000463631 RRAGBQ5VZM2 374 aa18.47■□□□□ 0.55
HMGN1-209ENST00000463631 KDF1Q8NAX2 398 aaPredicted RBP18.47■□□□□ 0.55
HMGN1-209ENST00000463631 HPDLQ96IR7 371 aa18.47■□□□□ 0.55
HMGN1-209ENST00000463631 TMEM121BQ9BXQ6 578 aaPredicted RBP18.47■□□□□ 0.55
HMGN1-209ENST00000463631 FGFBP2Q9BYJ0 223 aa18.47■□□□□ 0.55
HMGN1-209ENST00000463631 ZNF840PA6NDX5 716 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 C1QTNF9BB2RNN3 333 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 SLC9A3R1O14745 358 aaPredicted RBP18.46■□□□□ 0.55
HMGN1-209ENST00000463631 TRIM66O15016 1216 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 C1QTNF9P0C862 333 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 WARSP23381 471 aaKnown RBP18.46■□□□□ 0.55
HMGN1-209ENST00000463631 BDNFP23560 247 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 LMO2P25791 158 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 SEC13P55735 322 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 SURF1Q15526 300 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 CCDC73Q6ZRK6 1079 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 OR5B17Q8NGF7 314 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 MYCBPAPQ8TBZ2 947 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 PCED1BQ96HM7 432 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 C8orf48Q96LL4 319 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 INVSQ9Y283 1065 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 R3HCC1Q9Y3T6 440 aaKnown RBP18.46■□□□□ 0.55
HMGN1-209ENST00000463631 CLIC4Q9Y696 253 aa18.46■□□□□ 0.55
HMGN1-209ENST00000463631 MORC2Q9Y6X9 1032 aaPredicted RBP18.46■□□□□ 0.55
HMGN1-209ENST00000463631 A0A0A0MRY4 1105 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 TMEM8BA6NDV4 472 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 PATE3B3GLJ2 98 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 ALDH1A2O94788 518 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 OAS1P00973 400 aaKnown RBP18.45■□□□□ 0.54
HMGN1-209ENST00000463631 TNNC2P02585 160 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 IDEP14735 1019 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 HNRNPLP14866 589 aaKnown RBP eCLIP18.45■□□□□ 0.54
HMGN1-209ENST00000463631 ANXA13P27216 316 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 GRIK1P39086 918 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 P2RY2P41231 377 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 PI4KAP42356 2102 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 SPDYCQ5MJ68 293 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 TMEM92Q6UXU6 159 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 FILIP1Q7Z7B0 1213 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 WDR49Q8IV35 697 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 ADGRG2Q8IZP9 1017 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 IL17RCQ8NAC3 791 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 WHAMMQ8TF30 809 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 PCIF1Q9H4Z3 704 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 GON4LQ3T8J9 2241 aa18.45■□□□□ 0.54
HMGN1-209ENST00000463631 ITPR1Q14643 2758 aa18.44■□□□□ 0.54
HMGN1-209ENST00000463631 TNFRSF10BO14763 440 aa18.44■□□□□ 0.54
HMGN1-209ENST00000463631 DHPSP49366 369 aaPredicted RBP18.44■□□□□ 0.54
HMGN1-209ENST00000463631 LMAN2Q12907 356 aa18.44■□□□□ 0.54
HMGN1-209ENST00000463631 FOXC1Q12948 553 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms