RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 NIPA2Q8N8Q9 360 aa20.01■□□□□ 0.79
CCDC78-206ENST00000463539 SF3B1O75533 1304 aaKnown RBP eCLIP20.01■□□□□ 0.79
CCDC78-206ENST00000463539 TSC2P49815 1807 aa20.01■□□□□ 0.79
CCDC78-206ENST00000463539 MKI67P46013 3256 aaKnown RBP20■□□□□ 0.79
CCDC78-206ENST00000463539 AP1G2O75843 785 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 GABBR2O75899 941 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 OAZ2O95190 189 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 GALTP07902 379 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 PSMA2P25787 234 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 SSR1P43307 286 aaKnown RBP20■□□□□ 0.79
CCDC78-206ENST00000463539 RWDD2BP57060 319 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 SLC6A3Q01959 620 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 ITIH3Q06033 890 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 ELF2Q15723 593 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 DAB2IPQ5VWQ8 1189 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 RHOT1Q8IXI2 618 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 RASGEF1CQ8N431 466 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 SPATA4Q8NEY3 305 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 TOP1MTQ969P6 601 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 SMARCD1Q96GM5 515 aa20■□□□□ 0.79
CCDC78-206ENST00000463539 PIWIL1Q96J94 861 aaKnown RBP20■□□□□ 0.79
CCDC78-206ENST00000463539 RNPC3Q96LT9 517 aaKnown RBP20■□□□□ 0.79
CCDC78-206ENST00000463539 BUD13Q9BRD0 619 aaKnown RBP eCLIP20■□□□□ 0.79
CCDC78-206ENST00000463539 F8VP50 259 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 DYNC1I1O14576 645 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 PSTPIP1O43586 416 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 BEST1O76090 585 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 LCP1P13796 627 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 PBX3P40426 434 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 MAP3K7CLP57077 242 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 ZNF211Q13398 564 aaPredicted RBP19.99■□□□□ 0.79
CCDC78-206ENST00000463539 NOA1Q8NC60 698 aaKnown RBP19.99■□□□□ 0.79
CCDC78-206ENST00000463539 PKMYT1Q99640 499 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 ACRP10323 421 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 WDR5P61964 334 aaKnown RBP19.99■□□□□ 0.79
CCDC78-206ENST00000463539 C2orf54Q08AI8 447 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 ELAVL2Q12926 359 aaKnown RBP19.99■□□□□ 0.79
CCDC78-206ENST00000463539 FAM171A1Q5VUB5 890 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 KCTD13Q8WZ19 329 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 TMEM209Q96SK2 561 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 PRKAG2Q9UGJ0 569 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 TMEM59LQ9UK28 342 aa19.99■□□□□ 0.79
CCDC78-206ENST00000463539 TTC7AQ9ULT0 858 aaPredicted RBP19.99■□□□□ 0.79
CCDC78-206ENST00000463539 MICAL3Q7RTP6 2002 aa19.98■□□□□ 0.79
CCDC78-206ENST00000463539 BAIAP3O94812 1187 aa19.98■□□□□ 0.79
CCDC78-206ENST00000463539 ALDH7A1P49419 539 aaKnown RBP19.98■□□□□ 0.79
CCDC78-206ENST00000463539 TAS2R40P59535 323 aa19.98■□□□□ 0.79
CCDC78-206ENST00000463539 DEFB103AP81534 67 aa19.98■□□□□ 0.79
CCDC78-206ENST00000463539 ADIGQ0VDE8 80 aa19.98■□□□□ 0.79
CCDC78-206ENST00000463539 VARS2Q5ST30 1063 aaKnown RBP19.98■□□□□ 0.79
CCDC78-206ENST00000463539 SEL1L2Q5TEA6 688 aa19.98■□□□□ 0.79
CCDC78-206ENST00000463539 CC2D1AQ6P1N0 951 aaPredicted RBP19.98■□□□□ 0.79
CCDC78-206ENST00000463539 FUT10Q6P4F1 479 aa19.98■□□□□ 0.79
CCDC78-206ENST00000463539 CEP57Q86XR8 500 aa19.98■□□□□ 0.79
CCDC78-206ENST00000463539 SMOQ99835 787 aa19.98■□□□□ 0.79
CCDC78-206ENST00000463539 PLVAPQ9BX97 442 aa19.98■□□□□ 0.79
CCDC78-206ENST00000463539 GPR62Q9BZJ7 368 aa19.98■□□□□ 0.79
CCDC78-206ENST00000463539 LRRC4Q9HBW1 653 aa19.98■□□□□ 0.79
CCDC78-206ENST00000463539 TMLHEQ9NVH6 421 aa19.98■□□□□ 0.79
CCDC78-206ENST00000463539 NT5C1B-RDH14C9J2C7 533 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 GRAP2O75791 330 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 FGGP02679 453 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 GPD1P21695 349 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 SCNN1AP37088 669 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 ZNF143P52747 638 aaPredicted RBP19.97■□□□□ 0.79
CCDC78-206ENST00000463539 CLUL1Q15846 466 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 LRRTM3Q86VH5 581 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 SIX6OS1Q8N1H7 587 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 NAP1L3Q99457 506 aaPredicted RBP19.97■□□□□ 0.79
CCDC78-206ENST00000463539 IL23AQ9NPF7 189 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 PCDH10Q9P2E7 1040 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 C2CD4BA6NLJ0 364 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 PYGMP11217 842 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 PDGFRAP16234 1089 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 FLT3P36888 993 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 TAF5Q15542 800 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 ZNF280DQ6N043 979 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 FAM117BQ6P1L5 589 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 C4orf50Q6ZRC1 276 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 SLC26A9Q7LBE3 791 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 TMCO2Q7Z6W1 182 aaPredicted RBP19.97■□□□□ 0.79
CCDC78-206ENST00000463539 TMEM173Q86WV6 379 aaPredicted RBP19.97■□□□□ 0.79
CCDC78-206ENST00000463539 CLEC4CQ8WTT0 213 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 RXFP2Q8WXD0 754 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 RHOBTB2Q9BYZ6 727 aa19.97■□□□□ 0.79
CCDC78-206ENST00000463539 RBM12Q9NTZ6 932 aaKnown RBP19.97■□□□□ 0.79
CCDC78-206ENST00000463539 FGFR3P22607 806 aa19.96■□□□□ 0.79
CCDC78-206ENST00000463539 BDNFP23560 247 aa19.96■□□□□ 0.79
CCDC78-206ENST00000463539 GJC1P36383 396 aa19.96■□□□□ 0.79
CCDC78-206ENST00000463539 CACNA2D1P54289 1103 aa19.96■□□□□ 0.79
CCDC78-206ENST00000463539 ACAP1Q15027 740 aa19.96■□□□□ 0.79
CCDC78-206ENST00000463539 LONRF2Q1L5Z9 754 aa19.96■□□□□ 0.79
CCDC78-206ENST00000463539 SLC39A12Q504Y0 691 aa19.96■□□□□ 0.79
CCDC78-206ENST00000463539 LRRC38Q5VT99 294 aa19.96■□□□□ 0.79
CCDC78-206ENST00000463539 SPATA2LQ8IUW3 424 aaPredicted RBP19.96■□□□□ 0.79
CCDC78-206ENST00000463539 DCP1BQ8IZD4 617 aaKnown RBP19.96■□□□□ 0.79
CCDC78-206ENST00000463539 KCNK16Q96T55 309 aa19.96■□□□□ 0.79
CCDC78-206ENST00000463539 CNPY3Q9BT09 278 aa19.96■□□□□ 0.79
CCDC78-206ENST00000463539 ZCWPW1Q9H0M4 648 aa19.96■□□□□ 0.79
CCDC78-206ENST00000463539 CWH43Q9H720 699 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms