RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 PFKLP17858 780 aa23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 IFNAR2P48551 515 aa23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 CLDN10P78369 228 aa23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 GRSF1Q12849 480 aaKnown RBP eCLIP23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 USP4Q13107 963 aa23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 NCOA4Q13772 614 aa23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 CCINQ13939 588 aa23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 GAS6Q14393 721 aa23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 KIAA2013Q8IYS2 634 aa23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 ARL14EPQ8N8R7 260 aaPredicted RBP23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 CCDC34Q96HJ3 373 aa23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 DPEP3Q9H4B8 488 aa23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 DUS2Q9NX74 493 aaKnown RBP23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 RAB23Q9ULC3 237 aa23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 FAM237AA0A1B0GTK4 181 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 A0A1W2PQ27 194 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 A0A1W2PQ64 194 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 A0A1W2PQD8 194 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 F8VP50 259 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 PAPSS2O95340 614 aaPredicted RBP23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 ARSAP15289 507 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 HDCP19113 662 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 ID4P47928 161 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 PPP3CCP48454 512 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 NOP14P78316 857 aaKnown RBP23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 ZNF77Q15935 545 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 CEP135Q66GS9 1140 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 SCARA5Q6ZMJ2 495 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 ATP2A3Q93084 1043 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 TNIP3Q96KP6 325 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 CYP2S1Q96SQ9 504 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 TTLL2Q9BWV7 592 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 SMYD3Q9H7B4 428 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 GCNT4Q9P109 453 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 NME7Q9Y5B8 376 aa23.61■■□□□ 1.37
PDLIM7-206ENST00000463411 EP300Q09472 2414 aaPredicted RBP23.6■■□□□ 1.37
PDLIM7-206ENST00000463411 C2orf78A6NCI8 922 aa23.6■■□□□ 1.37
PDLIM7-206ENST00000463411 GOLGA6L22H0YM25 854 aa23.6■■□□□ 1.37
PDLIM7-206ENST00000463411 C4BPAP04003 597 aaKnown RBP23.6■■□□□ 1.37
PDLIM7-206ENST00000463411 WDR44Q5JSH3 913 aa23.6■■□□□ 1.37
PDLIM7-206ENST00000463411 RIN3Q8TB24 985 aa23.6■■□□□ 1.37
PDLIM7-206ENST00000463411 TMC2Q8TDI7 906 aa23.6■■□□□ 1.37
PDLIM7-206ENST00000463411 OSCP1Q8WVF1 389 aa23.6■■□□□ 1.37
PDLIM7-206ENST00000463411 SLC22A12Q96S37 553 aa23.6■■□□□ 1.37
PDLIM7-206ENST00000463411 ZNF518BQ9C0D4 1074 aa23.6■■□□□ 1.37
PDLIM7-206ENST00000463411 GMEB2Q9UKD1 530 aa23.6■■□□□ 1.37
PDLIM7-206ENST00000463411 ARHGAP26Q9UNA1 814 aa23.6■■□□□ 1.37
PDLIM7-206ENST00000463411 OTOGLQ3ZCN5 2332 aa23.6■■□□□ 1.37
PDLIM7-206ENST00000463411 RHOBTB3O94955 611 aa23.59■■□□□ 1.37
PDLIM7-206ENST00000463411 PRR29P0C7W0 189 aa23.59■■□□□ 1.37
PDLIM7-206ENST00000463411 USP46P62068 366 aa23.59■■□□□ 1.37
PDLIM7-206ENST00000463411 TMEM196Q5HYL7 178 aa23.59■■□□□ 1.37
PDLIM7-206ENST00000463411 KRBA2Q6ZNG9 492 aa23.59■■□□□ 1.37
PDLIM7-206ENST00000463411 DCLK2Q8N568 766 aa23.59■■□□□ 1.37
PDLIM7-206ENST00000463411 GPR161Q8N6U8 529 aaKnown RBP23.59■■□□□ 1.37
PDLIM7-206ENST00000463411 SH3RF2Q8TEC5 729 aa23.59■■□□□ 1.37
PDLIM7-206ENST00000463411 SLITRK1Q96PX8 696 aa23.59■■□□□ 1.37
PDLIM7-206ENST00000463411 MED10Q9BTT4 135 aa23.59■■□□□ 1.37
PDLIM7-206ENST00000463411 TRAF3IP3Q9Y228 551 aa23.59■■□□□ 1.37
PDLIM7-206ENST00000463411 WNT6Q9Y6F9 365 aa23.59■■□□□ 1.37
PDLIM7-206ENST00000463411 OTOL1A6NHN0 477 aaPredicted RBP23.58■■□□□ 1.37
PDLIM7-206ENST00000463411 TRDMT1O14717 391 aaKnown RBP23.58■■□□□ 1.37
PDLIM7-206ENST00000463411 TCF3P15923 654 aa23.58■■□□□ 1.37
PDLIM7-206ENST00000463411 TRIM21P19474 475 aaKnown RBP23.58■■□□□ 1.37
PDLIM7-206ENST00000463411 PIK3CAP42336 1068 aa23.58■■□□□ 1.37
PDLIM7-206ENST00000463411 RAP1GAPP47736 663 aa23.58■■□□□ 1.37
PDLIM7-206ENST00000463411 DLG4P78352 724 aa23.58■■□□□ 1.37
PDLIM7-206ENST00000463411 DPYDQ12882 1025 aa23.58■■□□□ 1.37
PDLIM7-206ENST00000463411 NR1H3Q13133 447 aa23.58■■□□□ 1.37
PDLIM7-206ENST00000463411 SGSM1Q2NKQ1 1148 aa23.58■■□□□ 1.37
PDLIM7-206ENST00000463411 TAF4BQ92750 862 aa23.58■■□□□ 1.37
PDLIM7-206ENST00000463411 B3GNT5Q9BYG0 378 aa23.58■■□□□ 1.37
PDLIM7-206ENST00000463411 ECT2Q9H8V3 914 aa23.58■■□□□ 1.37
PDLIM7-206ENST00000463411 ZNF292O60281 2723 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 CLDN5O00501 218 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 IKBKBO14920 756 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 MAPK13O15264 365 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 ATG13O75143 517 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 RTN3O95197 1032 aaPredicted RBP23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 VNN1O95497 513 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 ABL1P00519 1130 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 NR2F2P24468 414 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 CDH8P55286 799 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 IFRD2Q12894 506 aaPredicted RBP23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 ZACNQ401N2 412 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 FSTL4Q6MZW2 842 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 LONP2Q86WA8 852 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 P2RY13Q9BPV8 354 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 IMPG2Q9BZV3 1241 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 SPTBN4Q9H254 2564 aa23.57■■□□□ 1.36
PDLIM7-206ENST00000463411 ZNF840PA6NDX5 716 aa23.56■■□□□ 1.36
PDLIM7-206ENST00000463411 CHURC1-FNTBB4DL54 471 aa23.56■■□□□ 1.36
PDLIM7-206ENST00000463411 K7ESF4 209 aa23.56■■□□□ 1.36
PDLIM7-206ENST00000463411 NFATC1O95644 943 aa23.56■■□□□ 1.36
PDLIM7-206ENST00000463411 DRD1P21728 446 aa23.56■■□□□ 1.36
PDLIM7-206ENST00000463411 RPL13P26373 211 aaKnown RBP23.56■■□□□ 1.36
PDLIM7-206ENST00000463411 CNR2P34972 360 aa23.56■■□□□ 1.36
PDLIM7-206ENST00000463411 GJA4P35212 333 aa23.56■■□□□ 1.36
PDLIM7-206ENST00000463411 FNTBP49356 437 aa23.56■■□□□ 1.36
PDLIM7-206ENST00000463411 VAMP7P51809 220 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms