RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 C9orf57Q5W0N0 161 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 RINT1Q6NUQ1 792 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 ARMCX5Q6P1M9 558 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 DSTYKQ6XUX3 929 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 LPCAT2Q7L5N7 544 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 KCNK18Q7Z418 384 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 TMEFF1Q8IYR6 380 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 IGSF22Q8N9C0 903 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 IL17RCQ8NAC3 791 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 NSUN7Q8NE18 718 aaKnown RBP8.33□□□□□ -1.08
SMC3-202ENST00000462899 LEO1Q8WVC0 666 aaPredicted RBP8.33□□□□□ -1.08
SMC3-202ENST00000462899 RLN3Q8WXF3 142 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 WASF1Q92558 559 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 EXOC4Q96A65 974 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 DRC1Q96MC2 740 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 TSPAN18Q96SJ8 248 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 PKMYT1Q99640 499 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 TCHPQ9BT92 498 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 TMEM206Q9H813 350 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 BRMS1Q9HCU9 246 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 DDX19AQ9NUU7 478 aaKnown RBP8.33□□□□□ -1.08
SMC3-202ENST00000462899 TMLHEQ9NVH6 421 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 DUS2Q9NX74 493 aaKnown RBP8.33□□□□□ -1.08
SMC3-202ENST00000462899 KIAA1024Q9UPX6 916 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 COL6A6A6NMZ7 2263 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 KNTC1P50748 2209 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 A0A0A0MRY4 1105 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 CYSRT1A8MQ03 144 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 E9PMD0 336 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 SGK1O00141 431 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 ADAM23O75077 832 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 CBFA2T3O75081 653 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 DXOO77932 396 aaKnown RBP8.32□□□□□ -1.08
SMC3-202ENST00000462899 REC8O95072 547 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 PIGRP01833 764 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 SERPINF2P08697 491 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 FTH1P19P0C7X4 201 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 JUNDP17535 347 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 GUCY2CP25092 1073 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 CCT6AP40227 531 aaKnown RBP8.32□□□□□ -1.08
SMC3-202ENST00000462899 KIR2DL1P43626 348 aaPredicted RBP8.32□□□□□ -1.08
SMC3-202ENST00000462899 CDR1P51861 262 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 IRX6P78412 446 aaPredicted RBP8.32□□□□□ -1.08
SMC3-202ENST00000462899 MRPS21P82921 87 aaKnown RBP8.32□□□□□ -1.08
SMC3-202ENST00000462899 PPP2R3AQ06190 1150 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 ST3GAL1Q11201 340 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 HNRNPDQ14103 355 aaKnown RBP8.32□□□□□ -1.08
SMC3-202ENST00000462899 SAFBQ15424 915 aaKnown RBP eCLIP8.32□□□□□ -1.08
SMC3-202ENST00000462899 HSF5Q4G112 596 aaPredicted RBP8.32□□□□□ -1.08
SMC3-202ENST00000462899 C2orf27AQ580R0 203 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 LYSMD4Q5XG99 296 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 CC2D1AQ6P1N0 951 aaPredicted RBP8.32□□□□□ -1.08
SMC3-202ENST00000462899 ARMCX6Q7L4S7 300 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 GLRX5Q86SX6 157 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 EFCAB13Q8IY85 973 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 PHTF2Q8N3S3 785 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 MINDY1Q8N5J2 469 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 GLIS3Q8NEA6 775 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 CCDC26Q8TAB7 109 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 MDM1Q8TC05 714 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 WHAMMQ8TF30 809 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 LINC00597Q9H2U6 94 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 CCDC86Q9H6F5 360 aaKnown RBP8.32□□□□□ -1.08
SMC3-202ENST00000462899 CD248Q9HCU0 757 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 PDRG1Q9NUG6 133 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 SLC6A14Q9UN76 642 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 PTPN13Q12923 2485 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 COL12A1Q99715 3063 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 CKAP5Q14008 2032 aa8.32□□□□□ -1.08
SMC3-202ENST00000462899 SPTA1P02549 2419 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 CLDN3O15551 220 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 XPOTO43592 962 aaKnown RBP8.31□□□□□ -1.08
SMC3-202ENST00000462899 OPHN1O60890 802 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 CYP17A1P05093 508 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 NFICP08651 508 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 CSH1P0DML2 217 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 CSH2P0DML3 217 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 PLS3P13797 630 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 EIF2DP41214 584 aaKnown RBP8.31□□□□□ -1.08
SMC3-202ENST00000462899 IFNAR2P48551 515 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 MMP16P51512 607 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 NCKAP1LP55160 1127 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 SEC13P55735 322 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 PSMD2Q13200 908 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 SLC14A1Q13336 389 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 DUOXA1Q1HG43 343 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 ZC2HC1CQ53FD0 456 aaPredicted RBP8.31□□□□□ -1.08
SMC3-202ENST00000462899 SDHAF4Q5VUM1 108 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 JADE1Q6IE81 842 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 SLC39A4Q6P5W5 647 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 C12orf40Q86WS4 652 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 CCDC33Q8N5R6 958 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 ALLCQ8N6M5 410 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 KIAA1958Q8N8K9 716 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 TXNDC5Q8NBS9 432 aaKnown RBP8.31□□□□□ -1.08
SMC3-202ENST00000462899 OR2I1PQ8NGU4 316 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 CEP76Q8TAP6 659 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 BAHD1Q8TBE0 780 aaPredicted RBP8.31□□□□□ -1.08
SMC3-202ENST00000462899 LRRC15Q8TF66 581 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 MRPS31Q92665 395 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms