RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 C1QL1O75973 258 aa16.4■□□□□ 0.22
APP-211ENST00000462267 NFICP08651 508 aa16.4■□□□□ 0.22
APP-211ENST00000462267 CDC25AP30304 524 aa16.4■□□□□ 0.22
APP-211ENST00000462267 SLC6A11P48066 632 aa16.4■□□□□ 0.22
APP-211ENST00000462267 LIG4P49917 911 aa16.4■□□□□ 0.22
APP-211ENST00000462267 IRX6P78412 446 aaPredicted RBP16.4■□□□□ 0.22
APP-211ENST00000462267 CYP4F3Q08477 520 aa16.4■□□□□ 0.22
APP-211ENST00000462267 DHCR24Q15392 516 aa16.4■□□□□ 0.22
APP-211ENST00000462267 SFTPA1Q8IWL2 248 aa16.4■□□□□ 0.22
APP-211ENST00000462267 KCNV2Q8TDN2 545 aa16.4■□□□□ 0.22
APP-211ENST00000462267 KCNN1Q92952 543 aa16.4■□□□□ 0.22
APP-211ENST00000462267 RAB34Q9BZG1 259 aa16.4■□□□□ 0.22
APP-211ENST00000462267 ZDHHC5Q9C0B5 715 aa16.4■□□□□ 0.22
APP-211ENST00000462267 ARHGEF4Q9NR80 690 aa16.4■□□□□ 0.22
APP-211ENST00000462267 PCOLCE2Q9UKZ9 415 aa16.4■□□□□ 0.22
APP-211ENST00000462267 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.39■□□□□ 0.21
APP-211ENST00000462267 LEFTY2O00292 366 aa16.39■□□□□ 0.21
APP-211ENST00000462267 SLC9A3R1O14745 358 aaPredicted RBP16.39■□□□□ 0.21
APP-211ENST00000462267 ATXN7O15265 892 aaPredicted RBP16.39■□□□□ 0.21
APP-211ENST00000462267 ZNF217O75362 1048 aa16.39■□□□□ 0.21
APP-211ENST00000462267 PLA2G2AP14555 144 aa16.39■□□□□ 0.21
APP-211ENST00000462267 GNSP15586 552 aa16.39■□□□□ 0.21
APP-211ENST00000462267 GABRG2P18507 467 aa16.39■□□□□ 0.21
APP-211ENST00000462267 CYP2F1P24903 491 aa16.39■□□□□ 0.21
APP-211ENST00000462267 MESP2Q0VG99 397 aa16.39■□□□□ 0.21
APP-211ENST00000462267 RESTQ13127 1097 aa16.39■□□□□ 0.21
APP-211ENST00000462267 TRMT11Q7Z4G4 463 aaKnown RBP16.39■□□□□ 0.21
APP-211ENST00000462267 SLC41A1Q8IVJ1 513 aa16.39■□□□□ 0.21
APP-211ENST00000462267 IGSF22Q8N9C0 903 aa16.39■□□□□ 0.21
APP-211ENST00000462267 TRIML1Q8N9V2 468 aa16.39■□□□□ 0.21
APP-211ENST00000462267 LSM14AQ8ND56 463 aaKnown RBP16.39■□□□□ 0.21
APP-211ENST00000462267 CRELD1Q96HD1 420 aa16.39■□□□□ 0.21
APP-211ENST00000462267 HSPA12BQ96MM6 686 aa16.39■□□□□ 0.21
APP-211ENST00000462267 ASB7Q9H672 318 aa16.39■□□□□ 0.21
APP-211ENST00000462267 CALCOCO1Q9P1Z2 691 aa16.39■□□□□ 0.21
APP-211ENST00000462267 CPSF3Q9UKF6 684 aaKnown RBP16.39■□□□□ 0.21
APP-211ENST00000462267 C2CD2Q9Y426 696 aa16.39■□□□□ 0.21
APP-211ENST00000462267 SCN1AP35498 2009 aa16.38■□□□□ 0.21
APP-211ENST00000462267 ANK1P16157 1881 aa16.38■□□□□ 0.21
APP-211ENST00000462267 IGHV1OR15-9A0A0B4J2B8 117 aa16.38■□□□□ 0.21
APP-211ENST00000462267 KPNA7A9QM74 516 aa16.38■□□□□ 0.21
APP-211ENST00000462267 HNRNPDLO14979 420 aaKnown RBP16.38■□□□□ 0.21
APP-211ENST00000462267 ZBTB24O43167 697 aaPredicted RBP16.38■□□□□ 0.21
APP-211ENST00000462267 SCP2P22307 547 aa16.38■□□□□ 0.21
APP-211ENST00000462267 FOSBP53539 338 aa16.38■□□□□ 0.21
APP-211ENST00000462267 ZXDBP98169 803 aa16.38■□□□□ 0.21
APP-211ENST00000462267 SV2CQ496J9 727 aa16.38■□□□□ 0.21
APP-211ENST00000462267 SYCP2LQ5T4T6 812 aa16.38■□□□□ 0.21
APP-211ENST00000462267 KRT79Q5XKE5 535 aa16.38■□□□□ 0.21
APP-211ENST00000462267 FILIP1Q7Z7B0 1213 aa16.38■□□□□ 0.21
APP-211ENST00000462267 ZNF605Q86T29 641 aa16.38■□□□□ 0.21
APP-211ENST00000462267 RGL4Q8IZJ4 473 aa16.38■□□□□ 0.21
APP-211ENST00000462267 C4orf32Q8N8J7 132 aa16.38■□□□□ 0.21
APP-211ENST00000462267 NSUN7Q8NE18 718 aaKnown RBP16.38■□□□□ 0.21
APP-211ENST00000462267 ZNF419Q96HQ0 510 aaPredicted RBP16.38■□□□□ 0.21
APP-211ENST00000462267 PNMA5Q96PV4 448 aa16.38■□□□□ 0.21
APP-211ENST00000462267 KIF2CQ99661 725 aa16.38■□□□□ 0.21
APP-211ENST00000462267 ACBD6Q9BR61 282 aa16.38■□□□□ 0.21
APP-211ENST00000462267 ZDHHC4Q9NPG8 344 aa16.38■□□□□ 0.21
APP-211ENST00000462267 PTPRBP23467 1997 aa16.38■□□□□ 0.21
APP-211ENST00000462267 ZNF462Q96JM2 2506 aa16.38■□□□□ 0.21
APP-211ENST00000462267 CEP192Q8TEP8 1941 aa16.37■□□□□ 0.21
APP-211ENST00000462267 A0A0B4J269 797 aa16.37■□□□□ 0.21
APP-211ENST00000462267 TRABD2BA6NFA1 517 aa16.37■□□□□ 0.21
APP-211ENST00000462267 ADH1CP00326 375 aa16.37■□□□□ 0.21
APP-211ENST00000462267 PIGRP01833 764 aa16.37■□□□□ 0.21
APP-211ENST00000462267 ABCG1P45844 678 aa16.37■□□□□ 0.21
APP-211ENST00000462267 ATP2C1P98194 919 aaPredicted RBP16.37■□□□□ 0.21
APP-211ENST00000462267 RAD51AP2Q09MP3 1159 aa16.37■□□□□ 0.21
APP-211ENST00000462267 GRIK2Q13002 908 aa16.37■□□□□ 0.21
APP-211ENST00000462267 ANKRD1Q15327 319 aa16.37■□□□□ 0.21
APP-211ENST00000462267 CFAP221Q4G0U5 840 aa16.37■□□□□ 0.21
APP-211ENST00000462267 TTC38Q5R3I4 469 aa16.37■□□□□ 0.21
APP-211ENST00000462267 RHBDF2Q6PJF5 856 aa16.37■□□□□ 0.21
APP-211ENST00000462267 GALNT15Q8N3T1 639 aa16.37■□□□□ 0.21
APP-211ENST00000462267 NECAB1Q8N987 351 aa16.37■□□□□ 0.21
APP-211ENST00000462267 MSTO1Q9BUK6 570 aa16.37■□□□□ 0.21
APP-211ENST00000462267 DPP3Q9NY33 737 aa16.37■□□□□ 0.21
APP-211ENST00000462267 LARSQ9P2J5 1176 aaKnown RBP16.37■□□□□ 0.21
APP-211ENST00000462267 DKK1O94907 266 aa16.36■□□□□ 0.21
APP-211ENST00000462267 ZNF883P0CG24 379 aa16.36■□□□□ 0.21
APP-211ENST00000462267 NCKAP1LP55160 1127 aa16.36■□□□□ 0.21
APP-211ENST00000462267 SLC7A9P82251 487 aa16.36■□□□□ 0.21
APP-211ENST00000462267 INTS6LQ5JSJ4 861 aaKnown RBP16.36■□□□□ 0.21
APP-211ENST00000462267 WDR45BQ5MNZ6 344 aa16.36■□□□□ 0.21
APP-211ENST00000462267 KCNK18Q7Z418 384 aa16.36■□□□□ 0.21
APP-211ENST00000462267 C12orf40Q86WS4 652 aa16.36■□□□□ 0.21
APP-211ENST00000462267 SPRYD3Q8NCJ5 442 aa16.36■□□□□ 0.21
APP-211ENST00000462267 SETD7Q8WTS6 366 aaKnown RBP16.36■□□□□ 0.21
APP-211ENST00000462267 FOXJ1Q92949 421 aa16.36■□□□□ 0.21
APP-211ENST00000462267 GTF3C6Q969F1 213 aa16.36■□□□□ 0.21
APP-211ENST00000462267 FUBP3Q96I24 572 aaKnown RBP eCLIP16.36■□□□□ 0.21
APP-211ENST00000462267 ZNF560Q96MR9 790 aa16.36■□□□□ 0.21
APP-211ENST00000462267 CDC6Q99741 560 aa16.36■□□□□ 0.21
APP-211ENST00000462267 KCND2Q9NZV8 630 aa16.36■□□□□ 0.21
APP-211ENST00000462267 RAI2Q9Y5P3 530 aa16.36■□□□□ 0.21
APP-211ENST00000462267 CFAP46Q8IYW2 2715 aa16.36■□□□□ 0.21
APP-211ENST00000462267 MYO18AQ92614 2054 aaKnown RBP16.36■□□□□ 0.21
APP-211ENST00000462267 TENM4Q6N022 2769 aa16.36■□□□□ 0.21
APP-211ENST00000462267 GOLGA4Q13439 2230 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms