RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 C22orf23Q9BZE7 217 aa5.56□□□□□ -1.52
BRCA1-206ENST00000461574 SLITRK6Q9H5Y7 841 aa5.56□□□□□ -1.52
BRCA1-206ENST00000461574 LMAN1LQ9HAT1 526 aa5.56□□□□□ -1.52
BRCA1-206ENST00000461574 ZFP14Q9HCL3 533 aa5.56□□□□□ -1.52
BRCA1-206ENST00000461574 MIOSQ9NXC5 875 aa5.56□□□□□ -1.52
BRCA1-206ENST00000461574 GDE1Q9NZC3 331 aa5.56□□□□□ -1.52
BRCA1-206ENST00000461574 VPS54Q9P1Q0 977 aa5.56□□□□□ -1.52
BRCA1-206ENST00000461574 DNMT3BQ9UBC3 853 aaKnown RBP5.56□□□□□ -1.52
BRCA1-206ENST00000461574 CACNG4Q9UBN1 327 aa5.56□□□□□ -1.52
BRCA1-206ENST00000461574 SNX11Q9Y5W9 270 aa5.56□□□□□ -1.52
BRCA1-206ENST00000461574 NOTCH4Q99466 2003 aa5.56□□□□□ -1.52
BRCA1-206ENST00000461574 WDFY3Q8IZQ1 3526 aa5.56□□□□□ -1.52
BRCA1-206ENST00000461574 IGF2RP11717 2491 aa5.56□□□□□ -1.52
BRCA1-206ENST00000461574 KIF26AQ9ULI4 1882 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-206ENST00000461574 KRTAP9-7A8MTY7 169 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 ZNF197O14709 1029 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 ZNF263O14978 683 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 ADAMTS3O15072 1205 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 PROS1P07225 676 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 RHOP08100 348 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 POU2F2P09086 479 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 CCDC192P0DO97 292 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 PTPN2P17706 415 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 ARF4P18085 180 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-206ENST00000461574 CCNE1P24864 410 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 ARNTP27540 789 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 YWHABP31946 246 aaKnown RBP5.55□□□□□ -1.52
BRCA1-206ENST00000461574 KPNA1P52294 538 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-206ENST00000461574 RCAN1P53805 252 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 ARPP19P56211 112 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 SHC2P98077 582 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 RAB33AQ14088 237 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 NECTIN1Q15223 517 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 SF3A2Q15428 464 aaKnown RBP5.55□□□□□ -1.52
BRCA1-206ENST00000461574 CCDC6Q16204 474 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 KCNMB1Q16558 191 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 Q4G0T1 1027 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 CYP4A22Q5TCH4 519 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 STPG1Q5TH74 334 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 TANGO2Q6ICL3 276 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 IQCEQ6IPM2 695 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-206ENST00000461574 FERMT3Q86UX7 667 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 LONP2Q86WA8 852 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 CDR2LQ86X02 465 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-206ENST00000461574 SPACA3Q8IXA5 215 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 LNX1Q8TBB1 728 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-206ENST00000461574 GPBAR1Q8TDU6 330 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 ASB11Q8WXH4 323 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 CEP89Q96ST8 783 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 PAAF1Q9BRP4 392 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 LXNQ9BS40 222 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 PLA2G2FQ9BZM2 168 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 LSG1Q9H089 658 aaKnown RBP5.55□□□□□ -1.52
BRCA1-206ENST00000461574 ARRDC1-AS1Q9H2J1 176 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 DHX33Q9H6R0 707 aaKnown RBP5.55□□□□□ -1.52
BRCA1-206ENST00000461574 DDX25Q9UHL0 483 aaKnown RBP5.55□□□□□ -1.52
BRCA1-206ENST00000461574 CDY1Q9Y6F8 540 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 PKD1L2Q7Z442 2459 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 ZMYM2Q9UBW7 1377 aa5.55□□□□□ -1.52
BRCA1-206ENST00000461574 F5P12259 2224 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 LRRIQ4A6NIV6 560 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-206ENST00000461574 ADAM12O43184 909 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 B4GALT5O43286 388 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 PRPF3O43395 683 aaKnown RBP5.54□□□□□ -1.52
BRCA1-206ENST00000461574 TRAPPC3O43617 180 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 B3GAT3O94766 335 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 STBD1O95210 358 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 PRKCBP05771 671 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 THP07101 528 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 P4HBP07237 508 aaKnown RBP5.54□□□□□ -1.52
BRCA1-206ENST00000461574 HMGB1P09429 215 aaKnown RBP5.54□□□□□ -1.52
BRCA1-206ENST00000461574 C1QTNF9P0C862 333 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 MYL4P12829 197 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 TDGF1P13385 188 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 PSMC3P17980 439 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 NTF4P34130 210 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 NOVA1P51513 510 aaKnown RBP5.54□□□□□ -1.52
BRCA1-206ENST00000461574 LIMK1P53667 647 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 PTENP60484 403 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 CYP4A11Q02928 519 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 MBTD1Q05BQ5 628 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 CAPSQ13938 189 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 KRT32Q14532 448 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 NKPD1Q17RQ9 610 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 SLC5A9Q2M3M2 681 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 FAM78AQ5JUQ0 283 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 FYB2Q5VWT5 728 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 NCAPH2Q6IBW4 605 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 C1orf228Q6PIY5 440 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 ANKS3Q6ZW76 656 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 RTL10Q7L3V2 364 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 UBE3DQ7Z6J8 389 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 ZBTB8OSQ8IWT0 167 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 SPEM1Q8N4L4 309 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 BHLHE22Q8NFJ8 381 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-206ENST00000461574 DEPDC1BQ8WUY9 529 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 BRF1Q92994 677 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 LIN37Q96GY3 246 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms