RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 MYLK2Q9H1R3 596 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 CPVLQ9H3G5 476 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 SRP68Q9UHB9 627 aaKnown RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 PALLDQ8WX93 1383 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 PZPP20742 1482 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 SF3B1O75533 1304 aaKnown RBP eCLIP9.31□□□□□ -0.921e-6■■■■■ 112.6
BRCA1-205ENST00000461221 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 MGAT4DA6NG13 374 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 NDUFB5O43674 189 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ASNA1O43681 348 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ZNF862O60290 1169 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 SYNCRIPO60506 623 aaKnown RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 RPS6KA5O75582 802 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 GSTM1P09488 218 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 PDGFRBP09619 1106 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 TGM2P21980 687 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 CPA2P48052 419 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ZNF177Q13360 481 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 CDH18Q13634 790 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 EMC2Q15006 297 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 DCAF6Q58WW2 860 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 C10orf120Q5SQS8 335 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 HEATR4Q86WZ0 1026 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 SEPT1Q8WYJ6 367 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 VMP1Q96GC9 406 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 MAGED4Q96JG8 741 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 MAML3Q96JK9 1138 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 TRIM9Q9C026 710 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 NIF3L1Q9GZT8 377 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 GANQ9H2C0 597 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 IARS2Q9NSE4 1012 aaKnown RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 GCC2Q8IWJ2 1684 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 PSTPIP1O43586 416 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 TPST1O60507 370 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 KRT6BP04259 564 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 MUTP22033 750 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 PPP2R1BP30154 601 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 KRT6CP48668 564 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ACOT2P49753 483 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 PDZK1Q5T2W1 519 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 SHC4Q6S5L8 630 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 EPHX4Q8IUS5 362 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 SCUBE1Q8IWY4 988 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ZNF614Q8N883 585 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 RNASE11Q8TAA1 199 aaKnown RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 MAGEB18Q96M61 343 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 KLF6Q99612 283 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 KLHL4Q9C0H6 718 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 RBM12Q9NTZ6 932 aaKnown RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 PRMT7Q9NVM4 692 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 INTS13Q9NVM9 706 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 COMMD8Q9NX08 183 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 SNX13Q9Y5W8 968 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 WDR62O43379 1518 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 CDHR2Q9BYE9 1310 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 LINC00854A0A1B0GVQ3 168 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 POLRMTO00411 1230 aaKnown RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 PSMD14O00487 310 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 EXTL3O43909 919 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 NMT2O60551 498 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 FAM200BP0CF97 657 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 TFE3P19532 575 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 POU1F1P28069 291 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 PRDX5P30044 214 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 IL12RB1P42701 662 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 PGS1Q32NB8 556 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 USP38Q8NB14 1042 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 MKNK1Q9BUB5 465 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 NMRK2Q9NPI5 230 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 METTL5Q9NRN9 209 aaKnown RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 GJB4Q9NTQ9 266 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 SLC25A13Q9UJS0 675 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 NAGPAQ9UK23 515 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 VAV3Q9UKW4 847 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 PHTF1Q9UMS5 762 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 DRG1Q9Y295 367 aaKnown RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 FKBP6O75344 327 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 MED26O95402 600 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 HLA-DRAP01903 254 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 ATP6V1B2P21281 511 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 RFX3P48380 749 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 ATF7IP2Q5U623 682 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 TYW3Q6IPR3 259 aaKnown RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 PLEKHA7Q6IQ23 1121 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 PRMT9Q6P2P2 845 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 MACC1Q6ZN28 852 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 SGMS1Q86VZ5 419 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 KRT73Q86Y46 540 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 ADSSL1Q8N142 457 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 SYN2Q92777 582 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 ZIM3Q96PE6 472 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 KPNA4O00629 521 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 DDHD2O94830 711 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 RHOBTB3O94955 611 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 LRG1P02750 347 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 CAPN1P07384 714 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 RBP1P09455 135 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 ERVK-10P10266 1014 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 DDR2Q16832 855 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms