RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 POTEGQ6S5H5 508 aa9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 ARHGAP22Q7Z5H3 698 aa9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 CDH24Q86UP0 819 aa9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 CENPLQ8N0S6 344 aaPredicted RBP9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 ZFRQ96KR1 1074 aaKnown RBP9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 ADI1Q9BV57 179 aa9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 RAD21L1Q9H4I0 556 aa9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 C17orf75Q9HAS0 396 aa9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 ZFYVE1Q9HBF4 777 aa9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 SAE1Q9UBE0 346 aaPredicted RBP9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 NDUFB5O43674 189 aa9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 PLEKHA8P1O95397 391 aa9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 TKTP29401 623 aaKnown RBP9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 COBLL1Q53SF7 1204 aa9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 KRT74Q7RTS7 529 aa9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 RNF180Q86T96 592 aa9.21□□□□□ -0.94
SHROOM4-203ENST00000460112 SFI1A8K8P3 1242 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 ABLIM1O14639 778 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 DTNBO60941 627 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 DLGAP3O95886 979 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 PEX5P50542 639 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 RENBPP51606 427 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 SESN2P58004 480 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 C19orf18Q8NEA5 215 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 CEP44Q9C0F1 390 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 RPS6KA5O75582 802 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 PAX3P23760 479 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 COPAP53621 1224 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 COX10Q12887 443 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 NCOA4Q13772 614 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 COG2Q14746 738 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 CLEC16AQ2KHT3 1053 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 CYP4A22Q5TCH4 519 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 NAIF1Q69YI7 327 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 RINLQ6ZS11 566 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 STAG2Q8N3U4 1231 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 OSBPL8Q9BZF1 889 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 UBXN6Q9BZV1 441 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 SLITRK2Q9H156 845 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 DKK3Q9UBP4 350 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 NARFQ9UHQ1 456 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 ADGRB3O60242 1522 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 SLCO1B7G3V0H7 640 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 FAM200BP0CF97 657 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 GEMP55040 296 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 TRMT5Q32P41 509 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 CCDC144BQ3MJ40 725 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 ZFP1Q6P2D0 407 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 ITIH5Q86UX2 942 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 PPIL6Q8IXY8 311 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 CCDC28BQ9BUN5 200 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 COLEC11Q9BWP8 271 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 RNF112Q9ULX5 631 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 DRG1Q9Y295 367 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 NEU2Q9Y3R4 380 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 TULP4Q9NRJ4 1543 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 GPD1P21695 349 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 FBXW10Q5XX13 1052 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 MYO1HQ8N1T3 1032 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 DDHD1Q8NEL9 900 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 OTUD5Q96G74 571 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 MCEEQ96PE7 176 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 ZCCHC2Q9C0B9 1178 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 F5H423 210 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 EXTL3O43909 919 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 FBXO21O94952 628 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 CETPP11597 493 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 PDGFRAP16234 1089 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 IFNGR2P38484 337 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 PLOD1Q02809 727 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 EMC2Q15006 297 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 PTPAQ15257 358 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 PCMTD2Q9NV79 361 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 UBA2Q9UBT2 640 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 RPS6KA4O75676 772 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 CLTBP09497 229 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 CNPP09543 421 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 TPP2P29144 1249 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 PRCPP42785 496 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 ZNF177Q13360 481 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 C10orf120Q5SQS8 335 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 GPR141Q7Z602 305 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 MTERF3Q96E29 417 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 QKIQ96PU8 341 aaKnown RBP eCLIP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 STRBPQ96SI9 672 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 PRDM16Q9HAZ2 1276 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 NPHS2Q9NP85 383 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 RNF181Q9P0P0 153 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 LIMA1Q9UHB6 759 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 F5H5T6 163 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 TIMM44O43615 452 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 CRTAMO95727 393 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 FGFR4P22455 802 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 CTCFP49711 727 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 PRKAA2P54646 552 aa9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 DHX40Q8IX18 779 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.2□□□□□ -0.94
SHROOM4-203ENST00000460112 FAM220BPB1ANY3 271 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms