RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 FAM3CQ92520 227 aa17.54■□□□□ 0.4
SHANK2-213ENST00000460048 MSANTD3Q96H12 275 aa17.54■□□□□ 0.4
SHANK2-213ENST00000460048 SLC22A12Q96S37 553 aa17.54■□□□□ 0.4
SHANK2-213ENST00000460048 C8orf33Q9H7E9 229 aaPredicted RBP17.54■□□□□ 0.4
SHANK2-213ENST00000460048 THG1LQ9NWX6 298 aaKnown RBP17.54■□□□□ 0.4
SHANK2-213ENST00000460048 GTSE1Q9NYZ3 720 aa17.54■□□□□ 0.4
SHANK2-213ENST00000460048 HMGXB4Q9UGU5 601 aa17.54■□□□□ 0.4
SHANK2-213ENST00000460048 MAN1B1Q9UKM7 699 aa17.54■□□□□ 0.4
SHANK2-213ENST00000460048 MYO16Q9Y6X6 1858 aa17.54■□□□□ 0.4
SHANK2-213ENST00000460048 KINO60870 393 aaKnown RBP17.53■□□□□ 0.4
SHANK2-213ENST00000460048 EPB41P11171 864 aaKnown RBP17.53■□□□□ 0.4
SHANK2-213ENST00000460048 CCNE1P24864 410 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 NDST1P52848 882 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 FKBP3Q00688 224 aaKnown RBP17.53■□□□□ 0.4
SHANK2-213ENST00000460048 LRRC63Q05C16 580 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 INCA1Q0VD86 236 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 KRT39Q6A163 491 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 ACOT1Q86TX2 421 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 FAM35AQ86V20 835 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 CYP2S1Q96SQ9 504 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 TSG101Q99816 390 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 FAM83CQ9BQN1 747 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 IMPG2Q9BZV3 1241 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 MMRN2Q9H8L6 949 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 CYP3A43Q9HB55 503 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 TRPC7Q9HCX4 862 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 EHD2Q9NZN4 543 aa17.53■□□□□ 0.4
SHANK2-213ENST00000460048 NDRG2Q9UN36 371 aaKnown RBP17.53■□□□□ 0.4
SHANK2-213ENST00000460048 ATP8B3O60423 1300 aa17.52■□□□□ 0.4
SHANK2-213ENST00000460048 TRAV19A0A0A6YYK7 116 aa17.52■□□□□ 0.4
SHANK2-213ENST00000460048 C2orf78A6NCI8 922 aa17.52■□□□□ 0.4
SHANK2-213ENST00000460048 TRIM49BA6NDI0 452 aa17.52■□□□□ 0.4
SHANK2-213ENST00000460048 SLC16A3O15427 465 aaKnown RBP17.52■□□□□ 0.4
SHANK2-213ENST00000460048 USP17L7P0C7H9 530 aa17.52■□□□□ 0.4
SHANK2-213ENST00000460048 CD44P16070 742 aaKnown RBP17.52■□□□□ 0.4
SHANK2-213ENST00000460048 PFKLP17858 780 aa17.52■□□□□ 0.4
SHANK2-213ENST00000460048 SOX9P48436 509 aa17.52■□□□□ 0.4
SHANK2-213ENST00000460048 KPNA1P52294 538 aaPredicted RBP17.52■□□□□ 0.4
SHANK2-213ENST00000460048 TNK2Q07912 1038 aa17.52■□□□□ 0.4
SHANK2-213ENST00000460048 ISM2Q6H9L7 571 aa17.52■□□□□ 0.4
SHANK2-213ENST00000460048 C1orf228Q6PIY5 440 aa17.52■□□□□ 0.4
SHANK2-213ENST00000460048 RALGPS2Q86X27 583 aaPredicted RBP17.52■□□□□ 0.4
SHANK2-213ENST00000460048 FUKQ8N0W3 1084 aa17.52■□□□□ 0.4
SHANK2-213ENST00000460048 ARL14EPQ8N8R7 260 aaPredicted RBP17.52■□□□□ 0.4
SHANK2-213ENST00000460048 SEMA4DQ92854 862 aa17.52■□□□□ 0.4
SHANK2-213ENST00000460048 KCNK16Q96T55 309 aa17.52■□□□□ 0.4
SHANK2-213ENST00000460048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.52■□□□□ 0.4
SHANK2-213ENST00000460048 GKN1Q9NS71 199 aa17.52■□□□□ 0.4
SHANK2-213ENST00000460048 ZNF840PA6NDX5 716 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 SPECC1L-ADORA2AF8WAN1 911 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 TNFRSF10BO14763 440 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 STX10O60499 249 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 SP9P0CG40 484 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 CHRNB1P11230 501 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 TCF3P15923 654 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 BMP6P22004 513 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 CTHP32929 405 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 PPP3CCP48454 512 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 MXI1P50539 228 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 USP4Q13107 963 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 ORC1Q13415 861 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 ZNF77Q15935 545 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 TXNDC11Q6PKC3 985 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 FRMD5Q7Z6J6 570 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 NUP93Q8N1F7 819 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 ZMIZ2Q8NF64 920 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 TTC8Q8TAM2 541 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 SMARCD1Q96GM5 515 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 DHTKD1Q96HY7 919 aaPredicted RBP17.51■□□□□ 0.39
SHANK2-213ENST00000460048 FAXDC2Q96IV6 333 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 TWNKQ96RR1 684 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 MED10Q9BTT4 135 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 NIF3L1Q9GZT8 377 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 CHRDQ9H2X0 955 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 HPS4Q9NQG7 708 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 SPATA6Q9NWH7 488 aaPredicted RBP17.51■□□□□ 0.39
SHANK2-213ENST00000460048 IL37Q9NZH6 218 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 TRPM5Q9NZQ8 1165 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 CHMP5Q9NZZ3 219 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 MYO15AQ9UKN7 3530 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 USP34Q70CQ2 3546 aa17.51■□□□□ 0.39
SHANK2-213ENST00000460048 VPS13AQ96RL7 3174 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 PSMA7O14818 248 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 CILPO75339 1184 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 OLFM2O95897 454 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 CKMP06732 381 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 CCDC130P13994 396 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 HDCP19113 662 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 PPP1R2P41236 205 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 TAF10Q12962 218 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 STIM1Q13586 685 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 MORC3Q14149 939 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 ITPRIPL2Q3MIP1 535 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 WDR44Q5JSH3 913 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 C12orf29Q8N999 325 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 FBXL13Q8NEE6 735 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 WHAMMQ8TF30 809 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 SMOQ99835 787 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 LMAN1LQ9HAT1 526 aa17.5■□□□□ 0.39
SHANK2-213ENST00000460048 CSNK1G1Q9HCP0 422 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms