RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 ACP6Q9NPH0 428 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 CNGB3Q9NQW8 809 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 ABI2Q9NYB9 513 aaPredicted RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 DONSONQ9NYP3 566 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 STIM2Q9P246 746 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 MSRAQ9UJ68 235 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 RASAL2Q9UJF2 1139 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 MAFFQ9ULX9 164 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 PCDHGC5Q9Y5F6 944 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 ALG6Q9Y672 507 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 DUSP10Q9Y6W6 482 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 NCANO14594 1321 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 UTRNP46939 3433 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 EFCAB8A8MWE9 144 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 NT5C1B-RDH14C9J2C7 533 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 CCDC188H7C350 402 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 I3L4J1 428 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 PGRMC1O00264 195 aaKnown RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 C2CD2LO14523 706 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 NDC80O14777 642 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 PPEF2O14830 753 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 ZNF263O14978 683 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 SPTLC1O15269 473 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 DAPK3O43293 454 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 PSTPIP1O43586 416 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 BUB1BO60566 1050 aaPredicted RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 HSF2BPO75031 334 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 ERLIN1O75477 346 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 ZNF189O75820 626 aaPredicted RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 MTA2O94776 668 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 TJP3O95049 919 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 ZBED1O96006 694 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 ERBB2P04626 1255 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 ADH1AP07327 375 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLC2A3P11169 496 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 CCDC130P13994 396 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 COMTP21964 271 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 BDNFP23560 247 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 MAN1A1P33908 653 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 ACTN2P35609 894 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 GJC1P36383 396 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 GPD2P43304 727 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 PLA2G4AP47712 749 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 GABRB2P47870 512 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLC11A1P49279 550 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 AARSP49588 968 aaKnown RBP eCLIP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 PSEN1P49768 467 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 RGS7P49802 495 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 MNX1P50219 401 aaPredicted RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 TKTL1P51854 596 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 EPHB3P54753 998 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 COPS2P61201 443 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 IFRD2Q12894 506 aaPredicted RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 KRT81Q14533 505 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 PSMD5Q16401 504 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 LONRF2Q1L5Z9 754 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 BOLA3Q53S33 107 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 VARS2Q5ST30 1063 aaKnown RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 CYP4A22Q5TCH4 519 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 MEI1Q5TIA1 1274 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 PAPD7Q5XG87 772 aaKnown RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 TPGS2Q68CL5 300 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 PLEKHA7Q6IQ23 1121 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 PDE12Q6L8Q7 609 aaKnown RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 DENND1BQ6P3S1 775 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 CCDC149Q6ZUS6 474 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 PDZD4Q76G19 769 aaPredicted RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 BZW1Q7L1Q6 419 aaKnown RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 MAATS1Q7Z4T9 603 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 DDX53Q86TM3 631 aaKnown RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 ITIH5Q86UX2 942 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 FAM35AQ86V20 835 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 SCUBE3Q8IX30 993 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 COLGALT1Q8NBJ5 622 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 KCTD6Q8NC69 237 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 CXorf38Q8TB03 319 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 WHAMMQ8TF30 809 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 FNIP1Q8TF40 1166 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLC35F5Q8WV83 523 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 KBTBD7Q8WVZ9 684 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 KCTD13Q8WZ19 329 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 IRGQQ8WZA9 623 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 PCED1BQ96HM7 432 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 IGSF21Q96ID5 467 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 CAPZA3Q96KX2 299 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 RNPC3Q96LT9 517 aaKnown RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 SAMD11Q96NU1 681 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 GCNAQ96QF7 691 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 WDR24Q96S15 920 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 OSBPL9Q96SU4 736 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 PCDHB18PQ96TA0 734 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 SEPT5Q99719 369 aaPredicted RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 CNPY3Q9BT09 278 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 C11orf84Q9BUA3 381 aaPredicted RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 IRX2Q9BZI1 471 aaPredicted RBP6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 POPDC2Q9HBU9 364 aa6.13□□□□□ -1.43
RNU1-88P-201ENST00000459274 OSGEPQ9NPF4 335 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms