RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 USP25Q9UHP3 1055 aa12.12□□□□□ -0.47
PRAMEF35P-201ENST00000458709 DSEQ9UL01 958 aa12.12□□□□□ -0.47
PRAMEF35P-201ENST00000458709 ANK1P16157 1881 aa12.12□□□□□ -0.47
PRAMEF35P-201ENST00000458709 ZNF638Q14966 1978 aaKnown RBP12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 ANO9A1A5B4 782 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CYB561D2O14569 222 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 PRPF40AO75400 957 aaKnown RBP12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 ALDH1A2O94788 518 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 ADRB2P07550 413 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CSH1P0DML2 217 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CSH2P0DML3 217 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 GUCY2CP25092 1073 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CDC25AP30304 524 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 RDXP35241 583 aaKnown RBP12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 PSEN1P49768 467 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 UBE2HP62256 183 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CEBPZQ03701 1054 aaKnown RBP12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 MESP2Q0VG99 397 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 SMARCB1Q12824 385 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 ZNF423Q2M1K9 1284 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 MAP7D1Q3KQU3 841 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 PEAR1Q5VY43 1037 aaPredicted RBP12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 METTL23Q86XA0 190 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 ALLCQ8N6M5 410 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 ARL14EPQ8N8R7 260 aaPredicted RBP12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 TXNDC5Q8NBS9 432 aaKnown RBP12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 ENGASEQ8NFI3 743 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CCDC26Q8TAB7 109 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 SH3RF2Q8TEC5 729 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 WHAMMQ8TF30 809 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CLIC6Q96NY7 704 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 PNMA5Q96PV4 448 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 MFRPQ9BY79 579 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 TMEM206Q9H813 350 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 ZDHHC4Q9NPG8 344 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 PILRBQ9UKJ0 227 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 PCDHB5Q9Y5E4 795 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 TCHHQ07283 1943 aa12.11□□□□□ -0.47
PRAMEF35P-201ENST00000458709 TRAV19A0A0A6YYK7 116 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 C2orf78A6NCI8 922 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 SGK1O00141 431 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 OGTO15294 1046 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 OPHN1O60890 802 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 KLF8O95600 359 aaPredicted RBP12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 NFATC1O95644 943 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 MYL1P05976 194 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 USP17L7P0C7H9 530 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CD59P13987 128 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 TXLNAP40222 546 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 UBA7P41226 1012 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 LIG4P49917 911 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 SMTNP53814 917 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 NR1H3Q13133 447 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 TMEM132DQ14C87 1099 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 DDR2Q16832 855 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CCDC142Q17RM4 750 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CCDC73Q6ZRK6 1079 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 USP49Q70CQ1 688 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 DCP1BQ8IZD4 617 aaKnown RBP12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 THEM5Q8N1Q8 247 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 MINDY1Q8N5J2 469 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 DEFB119Q8N690 84 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 IL17RCQ8NAC3 791 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 MDM1Q8TC05 714 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 HNRNPLLQ8WVV9 542 aaKnown RBP12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 HMGB4Q8WW32 186 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 EPSTI1Q96J88 318 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 TIGD1Q96MW7 591 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CAMK1GQ96NX5 476 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 TIPINQ9BVW5 301 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CAPN10Q9HC96 672 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 KBTBD4Q9NVX7 518 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 GCNT4Q9P109 453 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 BCCIPQ9P287 314 aaKnown RBP eCLIP12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CPSF3Q9UKF6 684 aaKnown RBP12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 SLC6A14Q9UN76 642 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 IGSF10Q6WRI0 2623 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CELSR3Q9NYQ7 3312 aa12.1□□□□□ -0.47
PRAMEF35P-201ENST00000458709 PCDH15Q96QU1 1955 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 NPHP3-ACAD11A0A0J9YXS1 232 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 HNRNPDLO14979 420 aaKnown RBP12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 NOL4O94818 638 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 PAX3P23760 479 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 CYP2F1P24903 491 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 TIE1P35590 1138 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 TAF6P49848 677 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 NCKAP1LP55160 1127 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 MRPS21P82921 87 aaKnown RBP12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 ZXDBP98169 803 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 GFPT1Q06210 699 aaPredicted RBP12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 KYAT1Q16773 422 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 DUOXA1Q1HG43 343 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 EMC10Q5UCC4 262 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 LMBRD2Q68DH5 695 aaPredicted RBP12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 FMR1NBQ8N0W7 255 aaPredicted RBP12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 PNPLA1Q8N8W4 532 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 LRRC15Q8TF66 581 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 TRMT2BQ96GJ1 504 aaKnown RBP12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 TSPAN18Q96SJ8 248 aa12.09□□□□□ -0.47
PRAMEF35P-201ENST00000458709 MSTO1Q9BUK6 570 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms