RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ACSS3Q9H6R3 686 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 UGT1A7Q9HAW7 530 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 UGT1A10Q9HAW8 530 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 UGT1A8Q9HAW9 530 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 BRWD3Q6RI45 1802 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 TCRBV9S1A1TA0A576 114 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 H7C0C1 242 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 CYB561D2O14569 222 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 B4GALT5O43286 388 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 ATP5OP48047 213 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 RASSF2P50749 326 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 SLC25A11Q02978 314 aaKnown RBP20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 GNPTABQ3T906 1256 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 SCYL2Q6P3W7 929 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 RDM1Q8NG50 284 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 FBXO27Q8NI29 283 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 INPP5DQ92835 1189 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 NLRP4Q96MN2 994 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 DPPA5A6NC42 116 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 MIPP30301 263 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 CTC1Q2NKJ3 1217 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 C15orf59Q2T9L4 293 aaPredicted RBP20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 SLC45A4Q5BKX6 768 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 UCMAQ8WVF2 138 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 TWNKQ96RR1 684 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 PPP1R12CQ9BZL4 782 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 DHX33Q9H6R0 707 aaKnown RBP20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 CYLDQ9NQC7 956 aa20.47■□□□□ 0.87
CNEP1R1-203ENST00000458059 SPDYE5A6NIY4 337 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 H0YCG3 227 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 LDHAP00338 332 aaKnown RBP20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 ERBB2P04626 1255 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 DPEP1P16444 411 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 DRICH1Q6PGQ1 229 aaPredicted RBP20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 ADGRD1Q6QNK2 874 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 ZNF276Q8N554 614 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 GJA3Q9Y6H8 435 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 STYXL1Q9Y6J8 313 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 BACE1P56817 501 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 GHRHRQ02643 423 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 BLMHQ13867 455 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 PIWIL1Q96J94 861 aaKnown RBP20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 IQCGQ9H095 443 aaKnown RBP20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 BATF3Q9NR55 127 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 DDX56Q9NY93 547 aaKnown RBP20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 NR2E3Q9Y5X4 410 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 EME2A4GXA9 379 aaPredicted RBP20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 MCF2LO15068 1137 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 ARL2P36404 184 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 CDH6P55285 790 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 RTP1P59025 263 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 MCCD1P59942 119 aaPredicted RBP20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 ACSBG2Q5FVE4 666 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 PPP1R15BQ5SWA1 713 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 C4orf50Q6ZRC1 276 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 BRSK2Q8IWQ3 736 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 DNAJC9Q8WXX5 260 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 FAF2Q96CS3 445 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 CLPTM1LQ96KA5 538 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 RAB6BQ9NRW1 208 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 PIH1D1Q9NWS0 290 aaKnown RBP20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 PPP1R1BQ9UD71 204 aaPredicted RBP20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 ADGRA2Q96PE1 1338 aa20.46■□□□□ 0.87
CNEP1R1-203ENST00000458059 TRIM49D1C9J1S8 452 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 INO80B-WBP1J3KQ70 363 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 ENO1P06733 434 aaKnown RBP20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 KDSRQ06136 332 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 DPYSL3Q14195 570 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 DUOXA2Q1HG44 320 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 RGS9BPQ6ZS82 235 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 ZCCHC23Q6ZST2 131 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 NETO2Q8NC67 525 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 MZB1Q8WU39 189 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 ACAP3Q96P50 834 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 INO80BQ9C086 356 aaPredicted RBP20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 NMUR2Q9GZQ4 415 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 SMYD3Q9H7B4 428 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 NMRK1Q9NWW6 199 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 ZFATQ9P243 1243 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 CXorf49A8MYA2 514 aaPredicted RBP20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 SPATA31C2B4DYI2 1134 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 CAPN9O14815 690 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 LINGO3P0C6S8 592 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 ESRRAP11474 423 aaPredicted RBP20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 HADHQ16836 314 aaKnown RBP20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 KLHL38Q2WGJ6 581 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 FAM102AQ5T9C2 384 aaPredicted RBP20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 ARMC2Q8NEN0 867 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 CNTN6Q9UQ52 1028 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 AFG3L2Q9Y4W6 797 aa20.45■□□□□ 0.86
CNEP1R1-203ENST00000458059 CXCL8P10145 99 aa20.44■□□□□ 0.86
CNEP1R1-203ENST00000458059 WASF2Q9Y6W5 498 aa20.44■□□□□ 0.86
CNEP1R1-203ENST00000458059 NFASCO94856 1347 aa20.44■□□□□ 0.86
CNEP1R1-203ENST00000458059 CENPFP49454 3210 aa20.44■□□□□ 0.86
CNEP1R1-203ENST00000458059 H3BRJ5 948 aa20.44■□□□□ 0.86
CNEP1R1-203ENST00000458059 ADCY3O60266 1144 aa20.44■□□□□ 0.86
CNEP1R1-203ENST00000458059 ASPAP45381 313 aa20.44■□□□□ 0.86
CNEP1R1-203ENST00000458059 CCDC142Q17RM4 750 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms