RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 LMBRD2Q68DH5 695 aaPredicted RBP22.99■■□□□ 1.27
CPNE1-220ENST00000458038 TRAPPC11Q7Z392 1133 aa22.99■■□□□ 1.27
CPNE1-220ENST00000458038 TTC16Q8NEE8 873 aa22.99■■□□□ 1.27
CPNE1-220ENST00000458038 ZNF507Q8TCN5 953 aa22.99■■□□□ 1.27
CPNE1-220ENST00000458038 MYLPFQ96A32 169 aa22.99■■□□□ 1.27
CPNE1-220ENST00000458038 FAM84AQ96KN4 292 aa22.99■■□□□ 1.27
CPNE1-220ENST00000458038 HHIPQ96QV1 700 aa22.99■■□□□ 1.27
CPNE1-220ENST00000458038 FNBP1Q96RU3 617 aa22.99■■□□□ 1.27
CPNE1-220ENST00000458038 TRIM9Q9C026 710 aa22.99■■□□□ 1.27
CPNE1-220ENST00000458038 SNX25Q9H3E2 840 aa22.99■■□□□ 1.27
CPNE1-220ENST00000458038 CRTAC1Q9NQ79 661 aa22.99■■□□□ 1.27
CPNE1-220ENST00000458038 KIAA1549LQ6ZVL6 1849 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 SLC9A3R1O14745 358 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-220ENST00000458038 TM4SF5O14894 197 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 HCRTO43612 131 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 STX6O43752 255 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 PPP6R2O75170 966 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 PDGFRBP09619 1106 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 GNL1P36915 607 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-220ENST00000458038 MPLP40238 635 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 PSMC1P62191 440 aaKnown RBP22.98■■□□□ 1.27
CPNE1-220ENST00000458038 CYP27A1Q02318 531 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 PSMD2Q13200 908 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 SNRNP35Q16560 246 aaKnown RBP22.98■■□□□ 1.27
CPNE1-220ENST00000458038 CCDC142Q17RM4 750 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 IQUBQ8NA54 791 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 LINC00301Q8NCQ3 95 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 C8orf48Q96LL4 319 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 LINC00597Q9H2U6 94 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 PTPRJQ12913 1337 aa22.98■■□□□ 1.27
CPNE1-220ENST00000458038 SPTLC2O15270 562 aa22.97■■□□□ 1.27
CPNE1-220ENST00000458038 TNNI1P19237 187 aa22.97■■□□□ 1.27
CPNE1-220ENST00000458038 SLC7A9P82251 487 aa22.97■■□□□ 1.27
CPNE1-220ENST00000458038 E2F4Q16254 413 aa22.97■■□□□ 1.27
CPNE1-220ENST00000458038 STPG1Q5TH74 334 aa22.97■■□□□ 1.27
CPNE1-220ENST00000458038 EPM2AIP1Q7L775 607 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-220ENST00000458038 PCED1BQ96HM7 432 aa22.97■■□□□ 1.27
CPNE1-220ENST00000458038 DUSP15Q9H1R2 295 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-220ENST00000458038 CGNQ9P2M7 1197 aaKnown RBP22.97■■□□□ 1.27
CPNE1-220ENST00000458038 UBE4BO95155 1302 aa22.97■■□□□ 1.27
CPNE1-220ENST00000458038 ABCA7Q8IZY2 2146 aa22.97■■□□□ 1.27
CPNE1-220ENST00000458038 NUP205Q92621 2012 aa22.96■■□□□ 1.27
CPNE1-220ENST00000458038 ZNF840PA6NDX5 716 aa22.96■■□□□ 1.27
CPNE1-220ENST00000458038 HOXD13P35453 343 aa22.96■■□□□ 1.27
CPNE1-220ENST00000458038 ASIC1P78348 528 aa22.96■■□□□ 1.27
CPNE1-220ENST00000458038 PSMD6Q15008 389 aa22.96■■□□□ 1.27
CPNE1-220ENST00000458038 USP39Q53GS9 565 aaKnown RBP22.96■■□□□ 1.27
CPNE1-220ENST00000458038 FAM26FQ5R3K3 315 aa22.96■■□□□ 1.27
CPNE1-220ENST00000458038 NAIF1Q69YI7 327 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-220ENST00000458038 EZH1Q92800 747 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-220ENST00000458038 ZNF396Q96N95 335 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-220ENST00000458038 SLITRK1Q96PX8 696 aa22.96■■□□□ 1.27
CPNE1-220ENST00000458038 MAGEF1Q9HAY2 307 aa22.96■■□□□ 1.27
CPNE1-220ENST00000458038 AGPAT3Q9NRZ7 376 aa22.96■■□□□ 1.27
CPNE1-220ENST00000458038 LEFTY2O00292 366 aa22.95■■□□□ 1.26
CPNE1-220ENST00000458038 STAU1O95793 577 aaKnown RBP22.95■■□□□ 1.26
CPNE1-220ENST00000458038 DLATP10515 647 aaKnown RBP22.95■■□□□ 1.26
CPNE1-220ENST00000458038 TNNC1P63316 161 aa22.95■■□□□ 1.26
CPNE1-220ENST00000458038 CCDC6Q16204 474 aa22.95■■□□□ 1.26
CPNE1-220ENST00000458038 TDRD10Q5VZ19 366 aaKnown RBP22.95■■□□□ 1.26
CPNE1-220ENST00000458038 HS2ST1Q7LGA3 356 aa22.95■■□□□ 1.26
CPNE1-220ENST00000458038 DDX42Q86XP3 938 aaKnown RBP eCLIP22.95■■□□□ 1.26
CPNE1-220ENST00000458038 XXYLT1Q8NBI6 393 aa22.95■■□□□ 1.26
CPNE1-220ENST00000458038 GLIS3Q8NEA6 775 aa22.95■■□□□ 1.26
CPNE1-220ENST00000458038 TSTD1Q8NFU3 115 aa22.95■■□□□ 1.26
CPNE1-220ENST00000458038 OR6B3Q8NGW1 331 aa22.95■■□□□ 1.26
CPNE1-220ENST00000458038 USP33Q8TEY7 942 aa22.95■■□□□ 1.26
CPNE1-220ENST00000458038 CGRRF1Q99675 332 aa22.95■■□□□ 1.26
CPNE1-220ENST00000458038 C7orf25Q9BPX7 421 aa22.95■■□□□ 1.26
CPNE1-220ENST00000458038 ELOVL4Q9GZR5 314 aa22.95■■□□□ 1.26
CPNE1-220ENST00000458038 THADAQ6YHU6 1953 aa22.94■■□□□ 1.26
CPNE1-220ENST00000458038 F8VP50 259 aa22.94■■□□□ 1.26
CPNE1-220ENST00000458038 TGFB1I1O43294 461 aa22.94■■□□□ 1.26
CPNE1-220ENST00000458038 CST3P01034 146 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-220ENST00000458038 PTPN1P18031 435 aaKnown RBP22.94■■□□□ 1.26
CPNE1-220ENST00000458038 OPRD1P41143 372 aa22.94■■□□□ 1.26
CPNE1-220ENST00000458038 DGKEP52429 567 aa22.94■■□□□ 1.26
CPNE1-220ENST00000458038 USP46P62068 366 aa22.94■■□□□ 1.26
CPNE1-220ENST00000458038 MRPS21P82921 87 aaKnown RBP22.94■■□□□ 1.26
CPNE1-220ENST00000458038 WDR72Q3MJ13 1102 aa22.94■■□□□ 1.26
CPNE1-220ENST00000458038 MDH1BQ5I0G3 518 aa22.94■■□□□ 1.26
CPNE1-220ENST00000458038 ADGRG2Q8IZP9 1017 aa22.94■■□□□ 1.26
CPNE1-220ENST00000458038 RDH13Q8NBN7 331 aa22.94■■□□□ 1.26
CPNE1-220ENST00000458038 HPS3Q969F9 1004 aa22.94■■□□□ 1.26
CPNE1-220ENST00000458038 POLR3BQ9NW08 1133 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-220ENST00000458038 CEP295Q9C0D2 2601 aa22.94■■□□□ 1.26
CPNE1-220ENST00000458038 BCLAF3A2AJT9 711 aaKnown RBP22.93■■□□□ 1.26
CPNE1-220ENST00000458038 K7EQS6 105 aa22.93■■□□□ 1.26
CPNE1-220ENST00000458038 CUTAO60888 179 aa22.93■■□□□ 1.26
CPNE1-220ENST00000458038 YEATS4O95619 227 aa22.93■■□□□ 1.26
CPNE1-220ENST00000458038 OLFM2O95897 454 aa22.93■■□□□ 1.26
CPNE1-220ENST00000458038 PDIA4P13667 645 aaKnown RBP22.93■■□□□ 1.26
CPNE1-220ENST00000458038 ATICP31939 592 aa22.93■■□□□ 1.26
CPNE1-220ENST00000458038 EIF2DP41214 584 aaKnown RBP22.93■■□□□ 1.26
CPNE1-220ENST00000458038 CYP24A1Q07973 514 aa22.93■■□□□ 1.26
CPNE1-220ENST00000458038 TRPC3Q13507 836 aa22.93■■□□□ 1.26
CPNE1-220ENST00000458038 HSF5Q4G112 596 aaPredicted RBP22.93■■□□□ 1.26
CPNE1-220ENST00000458038 PDZD8Q8NEN9 1154 aa22.93■■□□□ 1.26
CPNE1-220ENST00000458038 OVCA2Q8WZ82 227 aa22.93■■□□□ 1.26
CPNE1-220ENST00000458038 SYAP1Q96A49 352 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms