RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 NPHS2Q9NP85 383 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 METTL5Q9NRN9 209 aaKnown RBP13.03□□□□□ -0.32
LINC00959-201ENST00000456581 SIX4Q9UIU6 781 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 TRIP12Q14669 1992 aaPredicted RBP13.03□□□□□ -0.32
LINC00959-201ENST00000456581 LACTBL1A8MY62 500 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 ARF4P18085 180 aaPredicted RBP13.03□□□□□ -0.32
LINC00959-201ENST00000456581 ATP5DP30049 168 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 GDF10P55107 478 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 BPIFB4P59827 614 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 CENPCQ03188 943 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 NFX1Q12986 1120 aaKnown RBP13.03□□□□□ -0.32
LINC00959-201ENST00000456581 AMHR2Q16671 573 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 MSS51Q4VC12 460 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 SLC7A6OSQ96CW6 309 aaPredicted RBP13.03□□□□□ -0.32
LINC00959-201ENST00000456581 PIDD1Q9HB75 910 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 SETD4Q9NVD3 440 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC00959-201ENST00000456581 SCN4AP35499 1836 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 A0A1B0GUA9 196 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 STAG3L1P0CL83 205 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 KIZQ2M2Z5 673 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 ZNF699Q32M78 642 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 WDR72Q3MJ13 1102 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 ANKRD22Q5VYY1 191 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 SPRYD7Q5W111 196 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 RHOT1Q8IXI2 618 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 FAM13CQ8NE31 585 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 PPTC7Q8NI37 304 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 GRK7Q8WTQ7 553 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 NLRP7Q8WX94 980 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 MCEEQ96PE7 176 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 FAM49AQ9H0Q0 323 aaPredicted RBP13.03□□□□□ -0.32
LINC00959-201ENST00000456581 C2orf40Q9H1Z8 148 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 HMGXB4Q9UGU5 601 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 LGALS13Q9UHV8 139 aa13.03□□□□□ -0.32
LINC00959-201ENST00000456581 LIASO43766 372 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 PEX11AO75192 247 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 KRT1P04264 644 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 ATP2A2P16615 1042 aaKnown RBP13.02□□□□□ -0.33
LINC00959-201ENST00000456581 ADRA1DP25100 572 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 ASPAP45381 313 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 SLC26A2P50443 739 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 IL9RQ01113 521 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 ENPEPQ07075 957 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 PDIA2Q13087 525 aaKnown RBP13.02□□□□□ -0.33
LINC00959-201ENST00000456581 TFDP1Q14186 410 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 CCNG2Q16589 344 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 MARCH8Q5T0T0 291 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 JADE1Q6IE81 842 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 KIAA0319LQ8IZA0 1049 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 MAB21L3Q8N8X9 362 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 CCDC89Q8N998 374 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 C1orf127Q8N9H9 656 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 LRRN4Q8WUT4 740 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 CDHR5Q9HBB8 845 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 GAS2O43903 313 aaKnown RBP13.02□□□□□ -0.33
LINC00959-201ENST00000456581 LINGO3P0C6S8 592 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 CCNB1P14635 433 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 KRT4P19013 534 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 GCKP35557 465 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 PTP4A2Q12974 167 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 THEMIS2Q5TEJ8 643 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 CST9Q5W186 159 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 ZCCHC9Q8N567 271 aaKnown RBP13.02□□□□□ -0.33
LINC00959-201ENST00000456581 UBR7Q8N806 425 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 FAM81BQ96LP2 452 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 NIF3L1Q9GZT8 377 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 SDCBP2Q9H190 292 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 PDZD7Q9H5P4 517 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 VTA1Q9NP79 307 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 UBN1Q9NPG3 1134 aa13.02□□□□□ -0.33
LINC00959-201ENST00000456581 TCRBV7S3A2A0A539 114 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 DYNC1LI2O43237 492 aaPredicted RBP13.01□□□□□ -0.33
LINC00959-201ENST00000456581 ITGB3P05106 788 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 TBXAS1P24557 533 aaPredicted RBP13.01□□□□□ -0.33
LINC00959-201ENST00000456581 ZNF132P52740 706 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 TAF11Q15544 211 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 TAF1BQ53T94 588 aaPredicted RBP13.01□□□□□ -0.33
LINC00959-201ENST00000456581 LVRNQ6Q4G3 990 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 MTHFD1LQ6UB35 978 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 WDTC1Q8N5D0 677 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 DENND1AQ8TEH3 1009 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 LRRC37BQ96QE4 947 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 TWNKQ96RR1 684 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 TINF2Q9BSI4 451 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 TBC1D10AQ9BXI6 508 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 RPF1Q9H9Y2 349 aaKnown RBP13.01□□□□□ -0.33
LINC00959-201ENST00000456581 FLRT1Q9NZU1 646 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 SLC17A7Q9P2U7 560 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 CNTN6Q9UQ52 1028 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 LRRD1A4D1F6 860 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 SGK1O00141 431 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 KIF1CO43896 1103 aaKnown RBP13.01□□□□□ -0.33
LINC00959-201ENST00000456581 SMNDC1O75940 238 aaKnown RBP eCLIP13.01□□□□□ -0.33
LINC00959-201ENST00000456581 CCND1P24385 295 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 RAD23BP54727 409 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 GPX6P59796 221 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 LACTBP83111 547 aaPredicted RBP13.01□□□□□ -0.33
LINC00959-201ENST00000456581 ATP11AP98196 1134 aa13.01□□□□□ -0.33
LINC00959-201ENST00000456581 ACVR2BQ13705 512 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms