RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 GPR152Q8TDT2 470 aa18.9■□□□□ 0.62
FAM239A-203ENST00000456563 GIPC2Q8TF65 315 aa18.9■□□□□ 0.62
FAM239A-203ENST00000456563 CPLX3Q8WVH0 158 aa18.9■□□□□ 0.62
FAM239A-203ENST00000456563 DDX1Q92499 740 aaKnown RBP18.9■□□□□ 0.62
FAM239A-203ENST00000456563 SYN2Q92777 582 aaPredicted RBP18.9■□□□□ 0.62
FAM239A-203ENST00000456563 APOL5Q9BWW9 433 aa18.9■□□□□ 0.62
FAM239A-203ENST00000456563 PIDD1Q9HB75 910 aa18.9■□□□□ 0.62
FAM239A-203ENST00000456563 SLC38A8A6NNN8 435 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 HHLA1C9JL84 531 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 M0QYV0 167 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 TNFRSF10BO14763 440 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 XPO1O14980 1071 aaKnown RBP18.89■□□□□ 0.61
FAM239A-203ENST00000456563 HMGA1P17096 107 aaKnown RBP18.89■□□□□ 0.61
FAM239A-203ENST00000456563 PTPN2P17706 415 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 KRT9P35527 623 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 PDE4CQ08493 712 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 TBX2Q13207 712 aaPredicted RBP18.89■□□□□ 0.61
FAM239A-203ENST00000456563 LEXMQ3ZCV2 418 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 ATAT1Q5SQI0 421 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 DENND5BQ6ZUT9 1274 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 TMC6Q7Z403 805 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 UBA3Q8TBC4 463 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 SLC35F5Q8WV83 523 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 RIPOR3Q96MK2 946 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 LRRC3Q9BY71 257 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 LHX5Q9H2C1 402 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 GRPEL1Q9HAV7 217 aa18.89■□□□□ 0.61
FAM239A-203ENST00000456563 DNMT3BQ9UBC3 853 aaKnown RBP18.89■□□□□ 0.61
FAM239A-203ENST00000456563 NOCTQ9UK39 431 aaKnown RBP18.89■□□□□ 0.61
FAM239A-203ENST00000456563 ADCY5O95622 1261 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 CFHP08603 1231 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 TPM1P09493 284 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 CDC25BP30305 580 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 SSTR3P32745 418 aaPredicted RBP18.88■□□□□ 0.61
FAM239A-203ENST00000456563 PRKCIP41743 596 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 MTHFRP42898 656 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 GPD2P43304 727 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 PLA2G4AP47712 749 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 EPHA5P54756 1037 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 ARID5AQ03989 594 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 SMAD4Q13485 552 aaKnown RBP18.88■□□□□ 0.61
FAM239A-203ENST00000456563 ARID5BQ14865 1188 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 CLUL1Q15846 466 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 ASIC2Q16515 512 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 E4F1Q66K89 784 aaPredicted RBP18.88■□□□□ 0.61
FAM239A-203ENST00000456563 DENND1BQ6P3S1 775 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 GRASPQ7Z6J2 395 aaPredicted RBP18.88■□□□□ 0.61
FAM239A-203ENST00000456563 PIGZQ86VD9 579 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 NUP93Q8N1F7 819 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 LEMD2Q8NC56 503 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 SUSD6Q92537 303 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 SECISBP2LQ93073 1101 aaKnown RBP18.88■□□□□ 0.61
FAM239A-203ENST00000456563 TRMT2BQ96GJ1 504 aaKnown RBP18.88■□□□□ 0.61
FAM239A-203ENST00000456563 MYRFLQ96LU7 910 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 TTLL2Q9BWV7 592 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 AVENQ9NQS1 362 aaPredicted RBP18.88■□□□□ 0.61
FAM239A-203ENST00000456563 PRDM6Q9NQX0 595 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 HCFC1R1Q9NWW0 138 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 COMMD8Q9NX08 183 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 IL37Q9NZH6 218 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 EHD2Q9NZN4 543 aa18.88■□□□□ 0.61
FAM239A-203ENST00000456563 MBTPS2O43462 519 aa18.87■□□□□ 0.61
FAM239A-203ENST00000456563 RTN3O95197 1032 aaPredicted RBP18.87■□□□□ 0.61
FAM239A-203ENST00000456563 SLC5A3P53794 718 aa18.87■□□□□ 0.61
FAM239A-203ENST00000456563 CDR2Q01850 454 aa18.87■□□□□ 0.61
FAM239A-203ENST00000456563 MTMR3Q13615 1198 aa18.87■□□□□ 0.61
FAM239A-203ENST00000456563 TAF12Q16514 161 aa18.87■□□□□ 0.61
FAM239A-203ENST00000456563 TMC8Q8IU68 726 aa18.87■□□□□ 0.61
FAM239A-203ENST00000456563 GPIHBP1Q8IV16 184 aa18.87■□□□□ 0.61
FAM239A-203ENST00000456563 STK32AQ8WU08 396 aa18.87■□□□□ 0.61
FAM239A-203ENST00000456563 KCTD13Q8WZ19 329 aa18.87■□□□□ 0.61
FAM239A-203ENST00000456563 NECTIN4Q96NY8 510 aa18.87■□□□□ 0.61
FAM239A-203ENST00000456563 CORO1BQ9BR76 489 aa18.87■□□□□ 0.61
FAM239A-203ENST00000456563 WDR6Q9NNW5 1121 aaKnown RBP18.87■□□□□ 0.61
FAM239A-203ENST00000456563 ASAH2Q9NR71 780 aa18.87■□□□□ 0.61
FAM239A-203ENST00000456563 UXTQ9UBK9 157 aaPredicted RBP18.87■□□□□ 0.61
FAM239A-203ENST00000456563 USP15Q9Y4E8 981 aaPredicted RBP18.87■□□□□ 0.61
FAM239A-203ENST00000456563 GRXCR2A6NFK2 248 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 TULP2O00295 520 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 MFAP3LO75121 409 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 FGF19O95750 216 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 RHOP08100 348 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 MMEP08473 750 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 CHRNB2P17787 502 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 HNRNPH3P31942 346 aaKnown RBP18.86■□□□□ 0.61
FAM239A-203ENST00000456563 CDH5P33151 784 aaPredicted RBP18.86■□□□□ 0.61
FAM239A-203ENST00000456563 KIF11P52732 1056 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 FMO1Q01740 532 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 PUS10Q3MIT2 529 aaKnown RBP18.86■□□□□ 0.61
FAM239A-203ENST00000456563 PABPC1LQ4VXU2 614 aaKnown RBP18.86■□□□□ 0.61
FAM239A-203ENST00000456563 RAB41Q5JT25 222 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 TAF3Q5VWG9 929 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 HS6ST3Q8IZP7 471 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 STKLD1Q8NE28 680 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 OR8K1Q8NGG5 319 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.86■□□□□ 0.61
FAM239A-203ENST00000456563 SLC20A1Q8WUM9 679 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 HSFY1Q96LI6 401 aa18.86■□□□□ 0.61
FAM239A-203ENST00000456563 ZNF334Q9HCZ1 680 aaPredicted RBP18.86■□□□□ 0.61
FAM239A-203ENST00000456563 THEGQ9P2T0 379 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms