RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 KHSRPQ92945 711 aaKnown RBP eCLIP17■□□□□ 0.31
TMEM220-202ENST00000455996 TOP1MTQ969P6 601 aa17■□□□□ 0.31
TMEM220-202ENST00000455996 CSNK1G1Q9HCP0 422 aa17■□□□□ 0.31
TMEM220-202ENST00000455996 SMARCAL1Q9NZC9 954 aa17■□□□□ 0.31
TMEM220-202ENST00000455996 EHD2Q9NZN4 543 aa17■□□□□ 0.31
TMEM220-202ENST00000455996 FAN1Q9Y2M0 1017 aa17■□□□□ 0.31
TMEM220-202ENST00000455996 PRG3Q9Y2Y8 225 aaPredicted RBP17■□□□□ 0.31
TMEM220-202ENST00000455996 COL4A6Q14031 1691 aa17■□□□□ 0.31
TMEM220-202ENST00000455996 C2CD4BA6NLJ0 364 aa16.99■□□□□ 0.31
TMEM220-202ENST00000455996 DPYSL4O14531 572 aa16.99■□□□□ 0.31
TMEM220-202ENST00000455996 EFEMP2O95967 443 aa16.99■□□□□ 0.31
TMEM220-202ENST00000455996 CSF2RAP15509 400 aa16.99■□□□□ 0.31
TMEM220-202ENST00000455996 RAG1P15918 1043 aa16.99■□□□□ 0.31
TMEM220-202ENST00000455996 FGFR3P22607 806 aa16.99■□□□□ 0.31
TMEM220-202ENST00000455996 ELAVL2Q12926 359 aaKnown RBP16.99■□□□□ 0.31
TMEM220-202ENST00000455996 FAM102AQ5T9C2 384 aaPredicted RBP16.99■□□□□ 0.31
TMEM220-202ENST00000455996 SLC26A9Q7LBE3 791 aa16.99■□□□□ 0.31
TMEM220-202ENST00000455996 PIGZQ86VD9 579 aa16.99■□□□□ 0.31
TMEM220-202ENST00000455996 RHOT1Q8IXI2 618 aa16.99■□□□□ 0.31
TMEM220-202ENST00000455996 MYLPFQ96A32 169 aa16.99■□□□□ 0.31
TMEM220-202ENST00000455996 RNPC3Q96LT9 517 aaKnown RBP16.99■□□□□ 0.31
TMEM220-202ENST00000455996 MED10Q9BTT4 135 aa16.99■□□□□ 0.31
TMEM220-202ENST00000455996 RC3H2Q9HBD1 1191 aaKnown RBP16.99■□□□□ 0.31
TMEM220-202ENST00000455996 F8VP50 259 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 BEST1O76090 585 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 BAIAP3O94812 1187 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 ZNF143P52747 638 aaPredicted RBP16.98■□□□□ 0.31
TMEM220-202ENST00000455996 TAS2R40P59535 323 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 TSPY1Q01534 308 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 TEX35Q5T0J7 233 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 LRRTM3Q86VH5 581 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 KATNAL2Q8IYT4 538 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 GPR161Q8N6U8 529 aaKnown RBP16.98■□□□□ 0.31
TMEM220-202ENST00000455996 TSC1Q92574 1164 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 ZNF689Q96CS4 500 aaPredicted RBP16.98■□□□□ 0.31
TMEM220-202ENST00000455996 SMARCD1Q96GM5 515 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 PIWIL1Q96J94 861 aaKnown RBP16.98■□□□□ 0.31
TMEM220-202ENST00000455996 NAP1L3Q99457 506 aaPredicted RBP16.98■□□□□ 0.31
TMEM220-202ENST00000455996 SMOQ99835 787 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 CNPY3Q9BT09 278 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 ZCWPW1Q9H0M4 648 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 CWH43Q9H720 699 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 PRDM5Q9NQX1 630 aaPredicted RBP16.98■□□□□ 0.31
TMEM220-202ENST00000455996 KRT82Q9NSB4 513 aa16.98■□□□□ 0.31
TMEM220-202ENST00000455996 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.98■□□□□ 0.31
TMEM220-202ENST00000455996 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.98■□□□□ 0.31
TMEM220-202ENST00000455996 V9GYY5 206 aaPredicted RBP16.98■□□□□ 0.31
TMEM220-202ENST00000455996 FNDC1Q4ZHG4 1894 aaPredicted RBP16.97■□□□□ 0.31
TMEM220-202ENST00000455996 AP1G2O75843 785 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 AMHP03971 560 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 PYGMP11217 842 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 PSMA2P25787 234 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 ELF2Q15723 593 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 RAB41Q5JT25 222 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 CC2D1AQ6P1N0 951 aaPredicted RBP16.97■□□□□ 0.31
TMEM220-202ENST00000455996 POLNQ7Z5Q5 900 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 SCUBE3Q8IX30 993 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 ARFGAP1Q8N6T3 406 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 ZMIZ2Q8NF64 920 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 PNPLA8Q9NP80 782 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 IL23AQ9NPF7 189 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 TMLHEQ9NVH6 421 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 ASNSD1Q9NWL6 643 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 HCSTQ9UBK5 93 aa16.97■□□□□ 0.31
TMEM220-202ENST00000455996 SF3B1O75533 1304 aaKnown RBP eCLIP16.97■□□□□ 0.31
TMEM220-202ENST00000455996 HHLA1C9JL84 531 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 LRCH4O75427 683 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 EN2P19622 333 aaPredicted RBP16.96■□□□□ 0.31
TMEM220-202ENST00000455996 GPD1P21695 349 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 BCAR1P56945 870 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 WDR5P61964 334 aaKnown RBP16.96■□□□□ 0.31
TMEM220-202ENST00000455996 ADCY1Q08828 1119 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 C2orf54Q08AI8 447 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 VARS2Q5ST30 1063 aaKnown RBP16.96■□□□□ 0.31
TMEM220-202ENST00000455996 TRNP1Q6NT89 227 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 FUT10Q6P4F1 479 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 SCML4Q8N228 414 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 EMC1Q8N766 993 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 EXD1Q8NHP7 514 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 RXFP2Q8WXD0 754 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 ANKRD7Q92527 254 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 TMEM209Q96SK2 561 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 PLVAPQ9BX97 442 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 OXCT2Q9BYC2 517 aaPredicted RBP16.96■□□□□ 0.31
TMEM220-202ENST00000455996 GPR62Q9BZJ7 368 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 RBM12Q9NTZ6 932 aaKnown RBP16.96■□□□□ 0.31
TMEM220-202ENST00000455996 TMEM30AQ9NV96 361 aa16.96■□□□□ 0.31
TMEM220-202ENST00000455996 OR6C75A6NL08 312 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 CCDC188H7C350 402 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 PIK3R2O00459 728 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 TBC1D4O60343 1298 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 FBXO21O94952 628 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 FGGP02679 453 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 GLI1P08151 1106 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 PDGFRAP16234 1089 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 PCK1P35558 622 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 FLT3P36888 993 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 PTPN9P43378 593 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 CACNA2D1P54289 1103 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 MAP3K7CLP57077 242 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms