RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 GABRQQ9UN88 632 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 PCDHGA9Q9Y5G4 932 aaKnown RBP2.85□□□□□ -1.95
LINC02540-201ENST00000455554 PCDHGA8Q9Y5G5 932 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 PCDHGA7Q9Y5G6 932 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 PCDHGA6Q9Y5G7 932 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 PCDHGA3Q9Y5H0 932 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 C4orf47A7E2U8 309 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 BTBD19C9JJ37 291 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 DCLK1O15075 740 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 ERC2O15083 957 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 TLR2O60603 784 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 TULP3O75386 442 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 ATXN1LP0C7T5 689 aaKnown RBP2.84□□□□□ -1.95
LINC02540-201ENST00000455554 FPR3P25089 353 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 HSD3B2P26439 372 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 PXNP49023 591 aaPredicted RBP2.84□□□□□ -1.95
LINC02540-201ENST00000455554 FXR1P51114 621 aaKnown RBP eCLIP2.84□□□□□ -1.95
LINC02540-201ENST00000455554 ID2Q02363 134 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 DSC2Q02487 901 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 ACAP2Q15057 778 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 LONRF3Q496Y0 759 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 ZNF585BQ52M93 769 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 RNF219Q5W0B1 726 aaPredicted RBP2.84□□□□□ -1.95
LINC02540-201ENST00000455554 RGS7BPQ6MZT1 257 aaPredicted RBP2.84□□□□□ -1.95
LINC02540-201ENST00000455554 ZNF549Q6P9A3 640 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 COLCA1Q6ZS62 124 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 FAM90A1Q86YD7 464 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 ARFGAP1Q8N6T3 406 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 C1orf162Q8NEQ5 155 aaPredicted RBP2.84□□□□□ -1.95
LINC02540-201ENST00000455554 GPATCH3Q96I76 525 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 TMEM184CQ9NVA4 438 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 HESX1Q9UBX0 185 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 HS3ST3B1Q9Y662 390 aa2.84□□□□□ -1.95
LINC02540-201ENST00000455554 LACTBL1A8MY62 500 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 CNOT3O75175 753 aaKnown RBP2.83□□□□□ -1.96
LINC02540-201ENST00000455554 GCATO75600 419 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 CLSTN1O94985 981 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 PRKCBP05771 671 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 VIL1P09327 827 aaKnown RBP2.83□□□□□ -1.96
LINC02540-201ENST00000455554 PIM1P11309 404 aaPredicted RBP2.83□□□□□ -1.96
LINC02540-201ENST00000455554 IARSP41252 1262 aaKnown RBP2.83□□□□□ -1.96
LINC02540-201ENST00000455554 LILRA4P59901 499 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 KIF23Q02241 960 aaPredicted RBP2.83□□□□□ -1.96
LINC02540-201ENST00000455554 E2F2Q14209 437 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 PTPROQ16827 1216 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 RNASE12Q5GAN4 147 aaKnown RBP2.83□□□□□ -1.96
LINC02540-201ENST00000455554 DGKKQ5KSL6 1271 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 KRT26Q7Z3Y9 468 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 BCDIN3DQ7Z5W3 292 aaKnown RBP2.83□□□□□ -1.96
LINC02540-201ENST00000455554 ANKRD13BQ86YJ7 626 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.83□□□□□ -1.96
LINC02540-201ENST00000455554 PELI3Q8N2H9 469 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 CNTD1Q8N815 330 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 SOCS4Q8WXH5 440 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 MAP4K1Q92918 833 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 TNPO1Q92973 898 aaKnown RBP2.83□□□□□ -1.96
LINC02540-201ENST00000455554 COA7Q96BR5 231 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 FAXDC2Q96IV6 333 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 MMS19Q96T76 1030 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.83□□□□□ -1.96
LINC02540-201ENST00000455554 SERPINB13Q9UIV8 391 aa2.83□□□□□ -1.96
LINC02540-201ENST00000455554 LRRC14BA6NHZ5 514 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 ARIH2O95376 493 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 MYCLP12524 364 aaPredicted RBP2.82□□□□□ -1.96
LINC02540-201ENST00000455554 THBS4P35443 961 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 IGBP1P78318 339 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 IQCB1Q15051 598 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 ATG9BQ674R7 924 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 ANO7Q6IWH7 933 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 GSG1LQ6UXU4 331 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 CPA6Q8N4T0 437 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 C3orf20Q8ND61 904 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 ATL2Q8NHH9 583 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 PNISRQ8TF01 805 aaKnown RBP2.82□□□□□ -1.96
LINC02540-201ENST00000455554 ZFYVE19Q96K21 471 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 CCDC17Q96LX7 622 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 ZPBPQ9BS86 351 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 DPCDQ9BVM2 203 aaPredicted RBP2.82□□□□□ -1.96
LINC02540-201ENST00000455554 CHMP4AQ9BY43 222 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 SLKQ9H2G2 1235 aaPredicted RBP2.82□□□□□ -1.96
LINC02540-201ENST00000455554 WDCPQ9H6R7 721 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 MLXIPQ9HAP2 919 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 MKS1Q9NXB0 559 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 ASIC5Q9NY37 505 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 NDRG4Q9ULP0 352 aaKnown RBP2.82□□□□□ -1.96
LINC02540-201ENST00000455554 POLHQ9Y253 713 aa2.82□□□□□ -1.96
LINC02540-201ENST00000455554 hCG_2014768A0A024R1R8 64 aa2.81□□□□□ -1.96
LINC02540-201ENST00000455554 KLHL33A6NCF5 533 aa2.81□□□□□ -1.96
LINC02540-201ENST00000455554 CENPBP07199 599 aaPredicted RBP2.81□□□□□ -1.96
LINC02540-201ENST00000455554 CTSAP10619 480 aa2.81□□□□□ -1.96
LINC02540-201ENST00000455554 IBSPP21815 317 aaPredicted RBP2.81□□□□□ -1.96
LINC02540-201ENST00000455554 CNGA1P29973 690 aa2.81□□□□□ -1.96
LINC02540-201ENST00000455554 RPS13P62277 151 aaKnown RBP2.81□□□□□ -1.96
LINC02540-201ENST00000455554 E2F1Q01094 437 aa2.81□□□□□ -1.96
LINC02540-201ENST00000455554 CFHR1Q03591 330 aa2.81□□□□□ -1.96
LINC02540-201ENST00000455554 PCBP2Q15366 365 aaKnown RBP eCLIP2.81□□□□□ -1.96
LINC02540-201ENST00000455554 CYP1B1Q16678 543 aa2.81□□□□□ -1.96
LINC02540-201ENST00000455554 C4orf46Q504U0 113 aa2.81□□□□□ -1.96
LINC02540-201ENST00000455554 RNF187Q5TA31 235 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms