RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 GLULP15104 373 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 FPR2P25090 351 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 MARK3P27448 753 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 PBX3P40426 434 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 ITGA1P56199 1179 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 RPL11P62913 178 aaKnown RBP4.2□□□□□ -1.74
RBM39-220ENST00000455343 KRT17Q04695 432 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 TRAF1Q13077 416 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 SMC1AQ14683 1233 aaKnown RBP4.2□□□□□ -1.74
RBM39-220ENST00000455343 SEC23AQ15436 765 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 TMEM266Q2M3C6 531 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 ZXDCQ2QGD7 858 aaPredicted RBP4.2□□□□□ -1.74
RBM39-220ENST00000455343 ZNF528Q3MIS6 628 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 FAM26FQ5R3K3 315 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 RARS2Q5T160 578 aaKnown RBP4.2□□□□□ -1.74
RBM39-220ENST00000455343 SPOUT1Q5T280 376 aaKnown RBP4.2□□□□□ -1.74
RBM39-220ENST00000455343 MROH9Q5TGP6 573 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 E4F1Q66K89 784 aaPredicted RBP4.2□□□□□ -1.74
RBM39-220ENST00000455343 IQCEQ6IPM2 695 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 C15orf39Q6ZRI6 1047 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 OTOP3Q7RTS5 596 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 PLPPR4Q7Z2D5 763 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 ZC3H18Q86VM9 953 aaKnown RBP4.2□□□□□ -1.74
RBM39-220ENST00000455343 C1orf210Q8IVY1 113 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 CCDC103Q8IW40 242 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 KIAA0319LQ8IZA0 1049 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 FAM26EQ8N5C1 309 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 RIN2Q8WYP3 895 aaPredicted RBP4.2□□□□□ -1.74
RBM39-220ENST00000455343 NELL1Q92832 810 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 GLG1Q92896 1179 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 PPP1R14AQ96A00 147 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 EVI5LQ96CN4 794 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 CDHR1Q96JP9 859 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 FAM227BQ96M60 508 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 PIGSQ96S52 555 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 RBM15Q96T37 977 aaKnown RBP eCLIP4.2□□□□□ -1.74
RBM39-220ENST00000455343 RTKNQ9BST9 563 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 FAM49AQ9H0Q0 323 aaPredicted RBP4.2□□□□□ -1.74
RBM39-220ENST00000455343 ZBP1Q9H171 429 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 CCSER2Q9H7U1 834 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 ATP6V0A4Q9HBG4 840 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 ENTPD7Q9NQZ7 604 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 SPG21Q9NZD8 308 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 ST3GAL5Q9UNP4 418 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 ATG2AQ2TAZ0 1938 aa4.2□□□□□ -1.74
RBM39-220ENST00000455343 SPTBN2O15020 2390 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 IGKV6D-21A0A0A0MT36 114 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 A0A0U1RQF3 1178 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 PRR5-ARHGAP8B1AHC4 643 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 B2RBV5 119 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 B4E1Z4 1266 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 ZNF213O14771 459 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 TBX1O43435 398 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 CXCL14O95715 111 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 CTSAP10619 480 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 EPCAMP16422 314 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 ATF4P18848 351 aaPredicted RBP4.19□□□□□ -1.74
RBM39-220ENST00000455343 MX1P20591 662 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 STARD6P59095 220 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 IGBP1P78318 339 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 ARHGAP8P85298 464 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 SP4Q02446 784 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 TROAPQ12815 778 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 KCNAB2Q13303 367 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 GIT2Q14161 759 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 PLCB4Q15147 1175 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 LETM2Q2VYF4 491 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 PRR31Q5SQ13 230 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 ODR4Q5SWX8 454 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 USP17L6PQ6QN14 398 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 MTHFD1LQ6UB35 978 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 TMC5Q6UXY8 1006 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 CD300LDQ6UXZ3 194 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 CCDC149Q6ZUS6 474 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 FAM228AQ86W67 206 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 TMEM173Q86WV6 379 aaPredicted RBP4.19□□□□□ -1.74
RBM39-220ENST00000455343 ZNF227Q86WZ6 799 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 HOMER1Q86YM7 354 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 LRRC43Q8N309 656 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 SLC44A3Q8N4M1 653 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 ZBTB44Q8NCP5 570 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 CMASQ8NFW8 434 aaPredicted RBP4.19□□□□□ -1.74
RBM39-220ENST00000455343 TRAPPC12Q8WVT3 735 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 DIO2Q92813 273 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 TNPO1Q92973 898 aaKnown RBP4.19□□□□□ -1.74
RBM39-220ENST00000455343 ZNF558Q96NG5 402 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 TBC1D17Q9HA65 648 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 ACTR10Q9NZ32 417 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 EPS15L1Q9UBC2 864 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 TMEFF2Q9UIK5 374 aaPredicted RBP4.19□□□□□ -1.74
RBM39-220ENST00000455343 MYRFQ9Y2G1 1151 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 TIMM13Q9Y5L4 95 aaPredicted RBP4.19□□□□□ -1.74
RBM39-220ENST00000455343 UBIAD1Q9Y5Z9 338 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 X6R8D5 127 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 FRYQ5TBA9 3013 aa4.19□□□□□ -1.74
RBM39-220ENST00000455343 PKD1L2Q7Z442 2459 aa4.18□□□□□ -1.74
RBM39-220ENST00000455343 NLRC5Q86WI3 1866 aa4.18□□□□□ -1.74
RBM39-220ENST00000455343 DENND3A2RUS2 1198 aa4.18□□□□□ -1.74
RBM39-220ENST00000455343 NT5C1B-RDH14C9J2C7 533 aa4.18□□□□□ -1.74
RBM39-220ENST00000455343 ARNTLO00327 626 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms