RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 HSFY1Q96LI6 401 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 C8orf48Q96LL4 319 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 NOX5Q96PH1 765 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 KCNK16Q96T55 309 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 SLC4A5Q9BY07 1137 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 CYLDQ9NQC7 956 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 REXO2Q9Y3B8 237 aaKnown RBP17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 HHLA1C9JL84 531 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 F8VP50 259 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 RFXAPO00287 272 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 TRIM66O15016 1216 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 SEC24AO95486 1093 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 KLRC2P26717 231 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 CLCN4P51793 760 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 PTP4A2Q12974 167 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 SPA17Q15506 151 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 PTPN20Q4JDL3 420 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 C10orf76Q5T2E6 689 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 MON1BQ7L1V2 547 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 PIGZQ86VD9 579 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 TCEAL8Q8IYN2 117 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 ACRBPQ8NEB7 543 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 KCTD13Q8WZ19 329 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 CPXM1Q96SM3 734 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 TTYH1Q9H313 450 aaPredicted RBP17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 FBXW11Q9UKB1 542 aa17.52■□□□□ 0.39
CCDC90B-202ENST00000455220 TMCO5BA8MYB1 307 aa17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 SOX1O00570 391 aaPredicted RBP17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 CLASP2O75122 1294 aaKnown RBP17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 IPO7O95373 1038 aaKnown RBP17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 FTLP02792 175 aaPredicted RBP17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 DEKP35659 375 aaKnown RBP17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 GABRB2P47870 512 aa17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 TUFMP49411 452 aaKnown RBP17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 C1QBPQ07021 282 aaKnown RBP17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 RAB41Q5JT25 222 aa17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 TMEM110Q86TL2 294 aa17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 VCPIP1Q96JH7 1222 aa17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 PPP1R13BQ96KQ4 1090 aa17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 CEP295NLQ96MC4 621 aa17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 DESI2Q9BSY9 194 aa17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 SLC27A5Q9Y2P5 690 aa17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 ADGRG1Q9Y653 693 aa17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 MTCL1Q9Y4B5 1905 aaKnown RBP17.51■□□□□ 0.39
CCDC90B-202ENST00000455220 GABBR2O75899 941 aa17.5■□□□□ 0.39
CCDC90B-202ENST00000455220 GLUD1P00367 558 aa17.5■□□□□ 0.39
CCDC90B-202ENST00000455220 GRIK1P39086 918 aa17.5■□□□□ 0.39
CCDC90B-202ENST00000455220 KRT83P78385 493 aa17.5■□□□□ 0.39
CCDC90B-202ENST00000455220 MGAT5BQ3V5L5 792 aa17.5■□□□□ 0.39
CCDC90B-202ENST00000455220 ERICH1Q86X53 443 aa17.5■□□□□ 0.39
CCDC90B-202ENST00000455220 DNAAF5Q86Y56 855 aa17.5■□□□□ 0.39
CCDC90B-202ENST00000455220 MCOLN2Q8IZK6 566 aa17.5■□□□□ 0.39
CCDC90B-202ENST00000455220 MSANTD4Q8NCY6 345 aa17.5■□□□□ 0.39
CCDC90B-202ENST00000455220 SEPT5Q99719 369 aaPredicted RBP17.5■□□□□ 0.39
CCDC90B-202ENST00000455220 CYP4F11Q9HBI6 524 aa17.5■□□□□ 0.39
CCDC90B-202ENST00000455220 INTUQ9ULD6 942 aa17.5■□□□□ 0.39
CCDC90B-202ENST00000455220 PCDHA13Q9Y5I0 950 aa17.5■□□□□ 0.39
CCDC90B-202ENST00000455220 ANKRD62A6NC57 917 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 TNFRSF10BO14763 440 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 ELF1P32519 619 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 MAGEA1P43355 309 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 ACADSBP45954 432 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 GPR15P49685 360 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 RGS7P49802 495 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 GSCP56915 257 aaPredicted RBP17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 RPL10AP62906 217 aaKnown RBP17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 DDR2Q16832 855 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 MMS22LQ6ZRQ5 1243 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 ADGRD2Q7Z7M1 963 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 SCN4BQ8IWT1 228 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 IPO4Q8TEX9 1081 aaKnown RBP17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 SLC22A17Q8WUG5 538 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 TRIM44Q96DX7 344 aaPredicted RBP17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 SPATA17Q96L03 361 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 C11orf70Q9BRQ4 267 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 LUC7LQ9NQ29 371 aaKnown RBP17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 LMCD1Q9NZU5 365 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 ADAM22Q9P0K1 906 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 TJP2Q9UDY2 1190 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 PYCARDQ9ULZ3 195 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 YIPF1Q9Y548 306 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 E5RJQ4 531 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 SOAT2O75908 522 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 ERBB2P04626 1255 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 CALB1P05937 261 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 H2AFZP0C0S5 128 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 ATF6P18850 670 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 GALCP54803 685 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 SNX16P57768 344 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 DUSP6Q16828 381 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 H2AFVQ71UI9 128 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 RTL10Q7L3V2 364 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 GPRIN1Q7Z2K8 1008 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 KREMEN2Q8NCW0 462 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 C18orf8Q96DM3 657 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 TRIM11Q96F44 468 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 CDCA3Q99618 268 aaPredicted RBP17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 PACSIN1Q9BY11 444 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 MIS12Q9H081 205 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms