RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 DDX42Q86XP3 938 aaKnown RBP eCLIP8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 SCN4BQ8IWT1 228 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 ZNF454Q8N9F8 522 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 C1orf127Q8N9H9 656 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 SPATA17Q96L03 361 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 PKMYT1Q99640 499 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 EDEM2Q9BV94 578 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 STRA6Q9BX79 667 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 KRTAP3-2Q9BYR7 98 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 ADAM33Q9BZ11 813 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 LRRC27Q9C0I9 530 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 DUSP15Q9H1R2 295 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 KIAA1586Q9HCI6 787 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 TMLHEQ9NVH6 421 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 TRPM5Q9NZQ8 1165 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 MAGEC2Q9UBF1 373 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 GTF3C4Q9UKN8 822 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 CDH9Q9ULB4 789 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 SNX9Q9Y5X1 595 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 MYMKA6NI61 221 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 FAM163BP0C2L3 166 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 ACAT1P24752 427 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 GPR15P49685 360 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 MRPS21P82921 87 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 CCDC6Q16204 474 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 DUOXA2Q1HG44 320 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 PREPLQ4J6C6 727 aaPredicted RBP8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 FAM171BQ6P995 826 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 CCDC65Q8IXS2 484 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 ABCA7Q8IZY2 2146 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 GPD1LQ8N335 351 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 TTC16Q8NEE8 873 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 SH3RF2Q8TEC5 729 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 LRRC15Q8TF66 581 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 CHFRQ96EP1 664 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 SAAL1Q96ER3 474 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 HPDLQ96IR7 371 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 SPACA7Q96KW9 195 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 CNOT6LQ96LI5 555 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 SYT15Q9BQS2 421 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 FAM117AQ9C073 453 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 GCNT4Q9P109 453 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 SRPRBQ9Y5M8 271 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 WNT6Q9Y6F9 365 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 PTPRDP23468 1912 aa8.58□□□□□ -1.04
NIF3L1-209ENST00000454952 PI4KAP42356 2102 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 FRMD3A2A2Y4 597 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 TMEM8BA6NDV4 472 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 ZNF233A6NK53 670 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 TADA3O75528 432 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 ADH1CP00326 375 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 CEACAM1P13688 526 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 IDEP14735 1019 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 CSRP1P21291 193 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 WARSP23381 471 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 GRIK1P39086 918 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 EIF2DP41214 584 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 STAT6P42226 847 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 NOVA1P51513 510 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 CDR1P51861 262 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 SLC7A9P82251 487 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 GRIN1Q05586 938 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 LMAN2Q12907 356 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 SOWAHAQ2M3V2 549 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 C8orf34Q49A92 452 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 SPDYCQ5MJ68 293 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 SDHAF4Q5VUM1 108 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 PMS2CLQ68D20 193 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 PSAPL1Q6NUJ1 521 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 DENND5BQ6ZUT9 1274 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 NUDT18Q6ZVK8 323 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 CYP2U1Q7Z449 544 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 RASSF3Q86WH2 238 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 ARL14EPQ8N8R7 260 aaPredicted RBP8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 TTC13Q8NBP0 860 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 USP33Q8TEY7 942 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 NOC3LQ8WTT2 800 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 EPSTI1Q96J88 318 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 SLITRK1Q96PX8 696 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 CYP2S1Q96SQ9 504 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 TMUB1Q9BVT8 246 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 REPIN1Q9BWE0 567 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 MTMR12Q9C0I1 747 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 FBRSL1Q9HCM7 1045 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 TMEM9BQ9NQ34 198 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 PANK4Q9NVE7 773 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 INTS13Q9NVM9 706 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 TBC1D14Q9P2M4 693 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 MMP17Q9ULZ9 603 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 LHX6Q9UPM6 363 aa8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 MORC2Q9Y6X9 1032 aaPredicted RBP8.57□□□□□ -1.04
NIF3L1-209ENST00000454952 PLXND1Q9Y4D7 1925 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 USP24Q9UPU5 2620 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 VPS37CA5D8V6 355 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 C4orf47A7E2U8 309 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 LEFTY2O00292 366 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 APODP05090 189 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 PROS1P07225 676 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms