RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 CHD7Q9P2D1 2997 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 MTCL1Q9Y4B5 1905 aaKnown RBP11.88□□□□□ -0.51
TRAF4-206ENST00000454852 FAM92AA1XBS5 289 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 TNFRSF10BO14763 440 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 CLASP2O75122 1294 aaKnown RBP11.88□□□□□ -0.51
TRAF4-206ENST00000454852 BEST1O76090 585 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 GLUD1P00367 558 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 MYBL1P10243 752 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 CYP2F1P24903 491 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 HOXA9P31269 272 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 SCNN1AP37088 669 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 ACADSBP45954 432 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 NSFP46459 744 aaKnown RBP11.88□□□□□ -0.51
TRAF4-206ENST00000454852 CACNA2D1P54289 1103 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 ARPP19P56211 112 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 RPL10AP62906 217 aaKnown RBP11.88□□□□□ -0.51
TRAF4-206ENST00000454852 KRT83P78385 493 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 ADCY1Q08828 1119 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 DUSP4Q13115 394 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 KCNC3Q14003 757 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 MTF1Q14872 753 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 TCEAL1Q15170 157 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 SPA17Q15506 151 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 DUSP6Q16828 381 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 NAA35Q5VZE5 725 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 PMF1Q6P1K2 205 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 ZNF662Q6ZS27 426 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 CCDC149Q6ZUS6 474 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 MON1BQ7L1V2 547 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 ZDHHC17Q8IUH5 632 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 MSANTD4Q8NCY6 345 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 C1orf131Q8NDD1 294 aaKnown RBP11.88□□□□□ -0.51
TRAF4-206ENST00000454852 UBA3Q8TBC4 463 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 MICAL1Q8TDZ2 1067 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 TRIM11Q96F44 468 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 PGLYRP2Q96PD5 576 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRAF4-206ENST00000454852 LUC7LQ9NQ29 371 aaKnown RBP11.88□□□□□ -0.51
TRAF4-206ENST00000454852 KCND1Q9NSA2 647 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 ABI2Q9NYB9 513 aaPredicted RBP11.88□□□□□ -0.51
TRAF4-206ENST00000454852 DPP7Q9UHL4 492 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 STRIP2Q9ULQ0 834 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 REXO2Q9Y3B8 237 aaKnown RBP11.88□□□□□ -0.51
TRAF4-206ENST00000454852 USP3Q9Y6I4 520 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 PLXNA3P51805 1871 aa11.88□□□□□ -0.51
TRAF4-206ENST00000454852 ANKRD62A6NC57 917 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 F8VP50 259 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 TULP2O00295 520 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 SOX1O00570 391 aaPredicted RBP11.87□□□□□ -0.51
TRAF4-206ENST00000454852 PJA2O43164 708 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 GABBR2O75899 941 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 IPO7O95373 1038 aaKnown RBP11.87□□□□□ -0.51
TRAF4-206ENST00000454852 SEC24AO95486 1093 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 FTLP02792 175 aaPredicted RBP11.87□□□□□ -0.51
TRAF4-206ENST00000454852 CALB1P05937 261 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 KLRC2P26717 231 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 MAP3K7CLP57077 242 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 PLD1Q13393 1074 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 PTPN20Q4JDL3 420 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 CCDC122Q5T0U0 273 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 PM20D1Q6GTS8 502 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 TMEM184AQ6ZMB5 413 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 ERICH1Q86X53 443 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 PASD1Q8IV76 773 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 MCOLN2Q8IZK6 566 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 KREMEN2Q8NCW0 462 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 IPO4Q8TEX9 1081 aaKnown RBP11.87□□□□□ -0.51
TRAF4-206ENST00000454852 CPA5Q8WXQ8 436 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 PPP2R3CQ969Q6 453 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 PPP1R13BQ96KQ4 1090 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 MYRFLQ96LU7 910 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 CPXM1Q96SM3 734 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 KCNK16Q96T55 309 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 TTLL2Q9BWV7 592 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 RHOBTB2Q9BYZ6 727 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 AVENQ9NQS1 362 aaPredicted RBP11.87□□□□□ -0.51
TRAF4-206ENST00000454852 SPTLC3Q9NUV7 552 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 TAS2R14Q9NYV8 317 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 WDR35Q9P2L0 1181 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 PCDHGC5Q9Y5F6 944 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 PCDHA13Q9Y5I0 950 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 INSL5Q9Y5Q6 135 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 ADGRG1Q9Y653 693 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 TRIOBPQ9H2D6 2365 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 TRANK1O15050 2925 aa11.87□□□□□ -0.51
TRAF4-206ENST00000454852 TCRBV5S1A1TA0A578 114 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 BTNL10A8MVZ5 291 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 FBXO21O94952 628 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 H2AFZP0C0S5 128 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 TMEM253P0C7T8 217 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 ATF6P18850 670 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 ELF1P32519 619 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 GRIK1P39086 918 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 MAGEA1P43355 309 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 VAV2P52735 878 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 ZNF268Q14587 947 aaPredicted RBP11.86□□□□□ -0.51
TRAF4-206ENST00000454852 COL19A1Q14993 1142 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 MGAT5BQ3V5L5 792 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 H2AFVQ71UI9 128 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 ARCQ7LC44 396 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms