RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TTC30AQ86WT1 665 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 ARFGAP2Q8N6H7 521 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 SLC2A14Q8TDB8 520 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 BCAS4Q8TDM0 211 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 RAB6CQ9H0N0 254 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 GPBP1L1Q9HC44 474 aaPredicted RBP14.34□□□□□ -0.11
CLK3-203ENST00000454830 CA12O43570 354 aa14.33□□□□□ -0.11
CLK3-203ENST00000454830 CAND2O75155 1236 aa14.33□□□□□ -0.11
CLK3-203ENST00000454830 GHRP10912 638 aa14.33□□□□□ -0.11
CLK3-203ENST00000454830 SLC8A3P57103 927 aa14.33□□□□□ -0.11
CLK3-203ENST00000454830 INCA1Q0VD86 236 aa14.33□□□□□ -0.11
CLK3-203ENST00000454830 STILQ15468 1287 aa14.33□□□□□ -0.11
CLK3-203ENST00000454830 SYCP2LQ5T4T6 812 aa14.33□□□□□ -0.11
CLK3-203ENST00000454830 GDF6Q6KF10 455 aaPredicted RBP14.33□□□□□ -0.11
CLK3-203ENST00000454830 HACE1Q8IYU2 909 aa14.33□□□□□ -0.11
CLK3-203ENST00000454830 ADGRF2Q8IZF7 708 aa14.33□□□□□ -0.11
CLK3-203ENST00000454830 LRRC52Q8N7C0 313 aa14.33□□□□□ -0.11
CLK3-203ENST00000454830 ART4Q93070 314 aa14.33□□□□□ -0.11
CLK3-203ENST00000454830 TRAIPQ9BWF2 469 aa14.33□□□□□ -0.11
CLK3-203ENST00000454830 LCMT1Q9UIC8 334 aa14.33□□□□□ -0.11
CLK3-203ENST00000454830 HEY1Q9Y5J3 304 aa14.33□□□□□ -0.11
CLK3-203ENST00000454830 MGAMO43451 1857 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 CEP350Q5VT06 3117 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 SPTLC1O15269 473 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 MMRN1Q13201 1228 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 KLF1Q13351 362 aaPredicted RBP14.33□□□□□ -0.12
CLK3-203ENST00000454830 PTK6Q13882 451 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 CCDC38Q502W7 563 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 PPP1R15BQ5SWA1 713 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 C1orf228Q6PIY5 440 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 GLIS1Q8NBF1 620 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 ARRDC4Q8NCT1 418 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 EPS8L3Q8TE67 593 aaKnown RBP14.33□□□□□ -0.12
CLK3-203ENST00000454830 CDC42EP4Q9H3Q1 356 aaKnown RBP14.33□□□□□ -0.12
CLK3-203ENST00000454830 LRRC4CQ9HCJ2 640 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 CWC15Q9P013 229 aaKnown RBP14.33□□□□□ -0.12
CLK3-203ENST00000454830 TCRBV5S1A1TA0A578 114 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 H7C0C1 242 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 HAS3O00219 553 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 LIASO43766 372 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 MYCP01106 439 aaPredicted RBP14.33□□□□□ -0.12
CLK3-203ENST00000454830 ATP5OP48047 213 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 IRAK1P51617 712 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 EIF3BP55884 814 aaKnown RBP14.33□□□□□ -0.12
CLK3-203ENST00000454830 SNX16P57768 344 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 CCDC142Q17RM4 750 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 SV2CQ496J9 727 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 LRRC38Q5VT99 294 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 DSTYKQ6XUX3 929 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 USP6NLQ92738 828 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 CNPY3Q9BT09 278 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 WHRNQ9P202 907 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 DERAQ9Y315 318 aa14.33□□□□□ -0.12
CLK3-203ENST00000454830 CASTOR2A6NHX0 329 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 CYB561D2O14569 222 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 RASGRF2O14827 1237 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 KDELR1P24390 212 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 RDXP35241 583 aaKnown RBP14.32□□□□□ -0.12
CLK3-203ENST00000454830 CDKN2BP42772 138 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 SF3A3Q12874 501 aaKnown RBP eCLIP14.32□□□□□ -0.122e-6■■■■■ 37.8
CLK3-203ENST00000454830 LONRF1Q17RB8 773 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 FAM172AQ8WUF8 416 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 CNTN3Q9P232 1028 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 TBK1Q9UHD2 729 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 DCDC2CA8MYV0 355 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 ATP2C2O75185 946 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 SYDE1Q6ZW31 735 aaPredicted RBP14.32□□□□□ -0.12
CLK3-203ENST00000454830 TRPV2Q9Y5S1 764 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 CLDN5O00501 218 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 ASGR1P07306 291 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 RARGP13631 454 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
CLK3-203ENST00000454830 ADCY1Q08828 1119 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 NME8Q8N427 588 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 ARFGAP1Q8N6T3 406 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 CLEC4CQ8WTT0 213 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 MCRS1Q96EZ8 462 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 SAYSD1Q9NPB0 183 aa14.32□□□□□ -0.12
CLK3-203ENST00000454830 NDUFAB1O14561 156 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 MCF2LO15068 1137 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 AOC2O75106 756 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 FGFR1P11362 822 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 PCBP1Q15365 356 aaKnown RBP eCLIP14.31□□□□□ -0.12
CLK3-203ENST00000454830 UBXN11Q5T124 520 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 WSCD1Q658N2 575 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 DARS2Q6PI48 645 aaKnown RBP14.31□□□□□ -0.12
CLK3-203ENST00000454830 CCDC33Q8N5R6 958 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 HASPINQ8TF76 798 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 NDRG1Q92597 394 aaKnown RBP14.31□□□□□ -0.12
CLK3-203ENST00000454830 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.31□□□□□ -0.12
CLK3-203ENST00000454830 H0YGN5 161 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 RIPK2O43353 540 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 PNPLA4P41247 253 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 ZNF143P52747 638 aaPredicted RBP14.31□□□□□ -0.12
CLK3-203ENST00000454830 EIF3EP60228 445 aaKnown RBP14.31□□□□□ -0.12
CLK3-203ENST00000454830 LRRC31Q6UY01 552 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 SMG8Q8ND04 991 aaKnown RBP14.31□□□□□ -0.12
CLK3-203ENST00000454830 BBOF1Q8ND07 529 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 SPATA18Q8TC71 538 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 FAXDC2Q96IV6 333 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms