RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 PTPN7P35236 360 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 SKOR1P84550 965 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 FIGNQ5HY92 759 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 DEFB107AQ8IZN7 70 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 GDPD5Q8WTR4 605 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 NIF3L1Q9GZT8 377 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 COG4Q9H9E3 785 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 PAK5Q9P286 719 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 SALL4Q9UJQ4 1053 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 PRG3Q9Y2Y8 225 aaPredicted RBP8.05□□□□□ -1.12
RIF1-206ENST00000453091 CROCC2H7BZ55 1655 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 WDR27A2RRH5 827 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 TSPAN3O60637 253 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 DNAJC8O75937 253 aaPredicted RBP8.05□□□□□ -1.12
RIF1-206ENST00000453091 PKNOX1P55347 436 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 SPDYAQ5MJ70 313 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 ITPRIPL1Q6GPH6 555 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 CYP2R1Q6VVX0 501 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 FAM172AQ8WUF8 416 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 KCNK16Q96T55 309 aa8.05□□□□□ -1.12
RIF1-206ENST00000453091 MRPL1Q9BYD6 325 aaKnown RBP8.05□□□□□ -1.12
RIF1-206ENST00000453091 PROSCO94903 275 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 CELF2O95319 508 aaKnown RBP8.04□□□□□ -1.12
RIF1-206ENST00000453091 SLC25A3Q00325 362 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 AMPD2Q01433 879 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 TAF1CQ15572 869 aaPredicted RBP8.04□□□□□ -1.12
RIF1-206ENST00000453091 TKFCQ3LXA3 575 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 BNIPLQ7Z465 357 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 CNDP1Q96KN2 507 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 FAM167AQ96KS9 214 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 SEPT5Q99719 369 aaPredicted RBP8.04□□□□□ -1.12
RIF1-206ENST00000453091 C17orf80Q9BSJ5 609 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 BCAS3Q9H6U6 928 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 REREQ9P2R6 1566 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 A0A1W2PPM1 405 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 TLR2O60603 784 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 CDH8P55286 799 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 CDK17Q00537 523 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 RXFP1Q9HBX9 757 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 ERVK-5Q9HDB9 667 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 CHST12Q9NRB3 414 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 LRRC4BQ9NT99 713 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 TAGLN3Q9UI15 199 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 NFKBIAP25963 317 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 CXCL9Q07325 125 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 ATP1A4Q13733 1029 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 SLC10A5Q5PT55 438 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 C16orf89Q6UX73 402 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 FAM96AQ9H5X1 160 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 CPA4Q9UI42 421 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 KRT16P08779 473 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 GHRP10912 638 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 AUHQ13825 339 aaKnown RBP8.04□□□□□ -1.12
RIF1-206ENST00000453091 N4BP2L1Q5TBK1 243 aaPredicted RBP8.04□□□□□ -1.12
RIF1-206ENST00000453091 PTAR1Q7Z6K3 402 aaPredicted RBP8.04□□□□□ -1.12
RIF1-206ENST00000453091 MCOLN2Q8IZK6 566 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 C2orf40Q9H1Z8 148 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 GRID1Q9ULK0 1009 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 CEP152O94986 1710 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 PIK3C2BO00750 1634 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 CD163L1Q9NR16 1453 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 C3orf70A6NLC5 250 aaPredicted RBP8.04□□□□□ -1.12
RIF1-206ENST00000453091 F8VP50 259 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 SCAMP3O14828 347 aaKnown RBP8.04□□□□□ -1.12
RIF1-206ENST00000453091 ZNF263O14978 683 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 USP12O75317 370 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 ZNF286BP0CG31 522 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 CRYMQ14894 314 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 SV2AQ7L0J3 742 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 APPL2Q8NEU8 664 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 COPS5Q92905 334 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 DIP2AQ14689 1571 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 TBC1D12O60347 775 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 ZNF235Q14590 738 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 CNGA2Q16280 664 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 TTC33Q6PID6 262 aaPredicted RBP8.04□□□□□ -1.12
RIF1-206ENST00000453091 TAGAPQ8N103 731 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 FAM162AQ96A26 154 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 RUBCNLQ9H714 662 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 KIF1BO60333 1816 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 M0QYT0 321 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 SLITRK3O94933 977 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 KLHL2O95198 593 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 DRD4P21917 467 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 CAP2P40123 477 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 DDR1Q08345 913 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 TMEM119Q4V9L6 283 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 TMCO5AQ8N6Q1 288 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.04□□□□□ -1.122e-6■■■■■ 54.9
RIF1-206ENST00000453091 EXOSC4Q9NPD3 245 aaKnown RBP8.04□□□□□ -1.12
RIF1-206ENST00000453091 GEMIN8Q9NWZ8 242 aaKnown RBP8.04□□□□□ -1.12
RIF1-206ENST00000453091 CD274Q9NZQ7 290 aa8.04□□□□□ -1.12
RIF1-206ENST00000453091 ENTPD3O75355 529 aa8.03□□□□□ -1.12
RIF1-206ENST00000453091 LYPLA1O75608 230 aaPredicted RBP8.03□□□□□ -1.12
RIF1-206ENST00000453091 USP1O94782 785 aa8.03□□□□□ -1.12
RIF1-206ENST00000453091 TRPC1P48995 793 aa8.03□□□□□ -1.12
RIF1-206ENST00000453091 PPP3CAQ08209 521 aa8.03□□□□□ -1.12
RIF1-206ENST00000453091 GTF2H3Q13889 308 aa8.03□□□□□ -1.12
RIF1-206ENST00000453091 TRIM60Q495X7 471 aa8.03□□□□□ -1.12
RIF1-206ENST00000453091 DLK2Q6UY11 383 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms