RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ANXA13P27216 316 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 PPP3CCP48454 512 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 NOP14P78316 857 aaKnown RBP11.64□□□□□ -0.55
USP1-204ENST00000452143 CEBPZQ03701 1054 aaKnown RBP11.64□□□□□ -0.55
USP1-204ENST00000452143 DMC1Q14565 340 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 SF3A2Q15428 464 aaKnown RBP11.64□□□□□ -0.55
USP1-204ENST00000452143 CCDC142Q17RM4 750 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 PLK5Q496M5 336 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 FAM173BQ6P4H8 233 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 DENND5BQ6ZUT9 1274 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 C11orf74Q86VG3 221 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 ARL14EPQ8N8R7 260 aaPredicted RBP11.64□□□□□ -0.55
USP1-204ENST00000452143 NOC3LQ8WTT2 800 aaKnown RBP11.64□□□□□ -0.55
USP1-204ENST00000452143 INTS4Q96HW7 963 aaKnown RBP11.64□□□□□ -0.55
USP1-204ENST00000452143 USP28Q96RU2 1077 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 CYP2S1Q96SQ9 504 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 TTLL2Q9BWV7 592 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 ZSCAN16Q9H4T2 348 aaPredicted RBP11.64□□□□□ -0.55
USP1-204ENST00000452143 HSPBP1Q9NZL4 362 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 MAGEC2Q9UBF1 373 aaPredicted RBP11.64□□□□□ -0.55
USP1-204ENST00000452143 PLXND1Q9Y4D7 1925 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 UBE4BO95155 1302 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 C2orf78A6NCI8 922 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 HCRTO43612 131 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 RHOBTB1O94844 696 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 OLFM2O95897 454 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 HDCP19113 662 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 NASPP49321 788 aaPredicted RBP11.63□□□□□ -0.55
USP1-204ENST00000452143 PSMC1P62191 440 aaKnown RBP11.63□□□□□ -0.55
USP1-204ENST00000452143 LMBRD2Q68DH5 695 aaPredicted RBP11.63□□□□□ -0.55
USP1-204ENST00000452143 NAIF1Q69YI7 327 aaPredicted RBP11.63□□□□□ -0.55
USP1-204ENST00000452143 SCARA3Q6AZY7 606 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 CBWD2Q8IUF1 395 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 PDILTQ8N807 584 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 TTC16Q8NEE8 873 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 OR5B17Q8NGF7 314 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 EZH1Q92800 747 aaPredicted RBP11.63□□□□□ -0.55
USP1-204ENST00000452143 PCED1BQ96HM7 432 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 FAM84AQ96KN4 292 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 TRIM9Q9C026 710 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 DUSP15Q9H1R2 295 aaPredicted RBP11.63□□□□□ -0.55
USP1-204ENST00000452143 CRTAC1Q9NQ79 661 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 KBTBD4Q9NVX7 518 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.63□□□□□ -0.55
USP1-204ENST00000452143 TRPM5Q9NZQ8 1165 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 FRYQ5TBA9 3013 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 THADAQ6YHU6 1953 aa11.63□□□□□ -0.55
USP1-204ENST00000452143 CFAP47Q6ZTR5 3102 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 TM4SF5O14894 197 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 ATP2C2O75185 946 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 TACC1O75410 805 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 FAM163BP0C2L3 166 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 BDNFP23560 247 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 LMO2P25791 158 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 GRIK1P39086 918 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 EIF2DP41214 584 aaKnown RBP11.62□□□□□ -0.55
USP1-204ENST00000452143 VASPP50552 380 aaPredicted RBP11.62□□□□□ -0.55
USP1-204ENST00000452143 SNRPFP62306 86 aaKnown RBP11.62□□□□□ -0.55
USP1-204ENST00000452143 SLC7A9P82251 487 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 AMPD3Q01432 767 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 CYP27A1Q02318 531 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 PSMD2Q13200 908 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 CCDC6Q16204 474 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 E2F4Q16254 413 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 SNRNP35Q16560 246 aaKnown RBP11.62□□□□□ -0.55
USP1-204ENST00000452143 ST3GAL2Q16842 350 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 STPG1Q5TH74 334 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 CNNM4Q6P4Q7 775 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 TRAPPC11Q7Z392 1133 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 GLIS3Q8NEA6 775 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 TSTD1Q8NFU3 115 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 MYCBPAPQ8TBZ2 947 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 C8orf48Q96LL4 319 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 MMS19Q96T76 1030 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 ELOVL4Q9GZR5 314 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 OCEL1Q9H607 264 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 MAGEF1Q9HAY2 307 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 AGPAT3Q9NRZ7 376 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 RXFP3Q9NSD7 469 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 ANGPTL2Q9UKU9 493 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 MTMR6Q9Y217 621 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 IGF2RP11717 2491 aa11.62□□□□□ -0.55
USP1-204ENST00000452143 ASPMQ8IZT6 3477 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 TNRC6BQ9UPQ9 1833 aaKnown RBP11.61□□□□□ -0.55
USP1-204ENST00000452143 ZNF840PA6NDX5 716 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 LEFTY2O00292 366 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 SLC9A3R1O14745 358 aaPredicted RBP11.61□□□□□ -0.55
USP1-204ENST00000452143 PPP6R2O75170 966 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 STAU1O95793 577 aaKnown RBP11.61□□□□□ -0.55
USP1-204ENST00000452143 CYP17A1P05093 508 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 PMLP29590 882 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 OPRD1P41143 372 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 USP46P62068 366 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 TNNC1P63316 161 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 SHC2P98077 582 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 STK38Q15208 465 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 FAM26FQ5R3K3 315 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 EPM2AIP1Q7L775 607 aaPredicted RBP11.61□□□□□ -0.55
USP1-204ENST00000452143 RASSF3Q86WH2 238 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 DDX42Q86XP3 938 aaKnown RBP eCLIP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms