RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 MLLT6P55198 1093 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 ZXDBP98169 803 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 PFKPQ01813 784 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 PRKCQQ04759 706 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 ZNF268Q14587 947 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 TAF12Q16514 161 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 DCAF17Q5H9S7 520 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 TCERG1LQ5VWI1 586 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 SLC4A11Q8NBS3 891 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 PRSS33Q8NF86 280 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 SLC2A14Q8TDB8 520 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 CYP2S1Q96SQ9 504 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 NT5C1AQ9BXI3 368 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 IMPG2Q9BZV3 1241 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 SMG9Q9H0W8 520 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 TBC1D17Q9HA65 648 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 CISHQ9NSE2 258 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 CCL26Q9Y258 94 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 CHADO15335 359 aa17.1■□□□□ 0.33
SCAMP4-205ENST00000452128 OLFM2O95897 454 aa17.1■□□□□ 0.33
SCAMP4-205ENST00000452128 ZDHHC11BP0C7U3 371 aa17.1■□□□□ 0.33
SCAMP4-205ENST00000452128 TCF15Q12870 199 aa17.1■□□□□ 0.33
SCAMP4-205ENST00000452128 MLF2Q15773 248 aaPredicted RBP17.1■□□□□ 0.33
SCAMP4-205ENST00000452128 DPCR1Q3MIW9 517 aa17.1■□□□□ 0.33
SCAMP4-205ENST00000452128 SNX30Q5VWJ9 437 aa17.1■□□□□ 0.33
SCAMP4-205ENST00000452128 SUGP1Q8IWZ8 645 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-205ENST00000452128 NUP93Q8N1F7 819 aa17.1■□□□□ 0.33
SCAMP4-205ENST00000452128 MAB21L3Q8N8X9 362 aa17.1■□□□□ 0.33
SCAMP4-205ENST00000452128 SCAMP5Q8TAC9 235 aa17.1■□□□□ 0.33
SCAMP4-205ENST00000452128 FAM83CQ9BQN1 747 aa17.1■□□□□ 0.33
SCAMP4-205ENST00000452128 NUP62CLQ9H1M0 184 aa17.1■□□□□ 0.33
SCAMP4-205ENST00000452128 SLITRK6Q9H5Y7 841 aa17.1■□□□□ 0.33
SCAMP4-205ENST00000452128 DENND4CQ5VZ89 1909 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 C2orf78A6NCI8 922 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 GLULP15104 373 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 TCF3P15923 654 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 PFKLP17858 780 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 ACO1P21399 889 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 GDI1P31150 447 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 PGFP49763 221 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 KCNH2Q12809 1159 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 TAF10Q12962 218 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 CUL2Q13617 745 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 WDR44Q5JSH3 913 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 TTC39CQ8N584 583 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 CELF5Q8N6W0 485 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 MRPS31Q92665 395 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 IRF7Q92985 503 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 CYFIP2Q96F07 1278 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 SMARCD1Q96GM5 515 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 DMAP1Q9NPF5 467 aaPredicted RBP17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 FAM49BQ9NUQ9 324 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 TDP1Q9NUW8 608 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 COMMD8Q9NX08 183 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 MTF2Q9Y483 593 aaPredicted RBP17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 COL4A3Q01955 1670 aa17.09■□□□□ 0.33
SCAMP4-205ENST00000452128 KMT2EQ8IZD2 1858 aa17.08■□□□□ 0.33
SCAMP4-205ENST00000452128 COL4A2P08572 1712 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 AP1G2O75843 785 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 OAS1P00973 400 aaKnown RBP17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 CD58P19256 250 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 ERCC5P28715 1186 aaPredicted RBP17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 PPP3CCP48454 512 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 CCDC40Q4G0X9 1142 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 PPP1R26Q5T8A7 1209 aaPredicted RBP17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 ARHGAP17Q68EM7 881 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 CLEC20AQ6ZU45 233 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 EHBP1Q8NDI1 1231 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 FLCNQ8NFG4 579 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 BPIFB1Q8TDL5 484 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 TMEM176AQ96HP8 235 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 GBP4Q96PP9 640 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 GCNAQ96QF7 691 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 OSBPL6Q9BZF3 934 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 RNF38Q9H0F5 515 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 BRD9Q9H8M2 597 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 HEBP1Q9NRV9 189 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 KRT82Q9NSB4 513 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 HCN4Q9Y3Q4 1203 aa17.08■□□□□ 0.32
SCAMP4-205ENST00000452128 KANSL1LA0AUZ9 987 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 ZNF263O14978 683 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 RTN3O95197 1032 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 ANXA13P27216 316 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 YWHAQP27348 245 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 SLC5A3P53794 718 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 CT47A1Q5JQC4 288 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 DPY19L2P1Q6NXN4 242 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 GPRIN1Q7Z2K8 1008 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 ARL14EPQ8N8R7 260 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 CCDC150Q8NCX0 1101 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 OVCA2Q8WZ82 227 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 KAT5Q92993 513 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 CLDN23Q96B33 292 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 CHFRQ96EP1 664 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 SHDQ96IW2 340 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 DUSP16Q9BY84 665 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 UBXN6Q9BZV1 441 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 FOXQ1Q9C009 403 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 PNPLA8Q9NP80 782 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 EHD2Q9NZN4 543 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 329.7 ms