RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 ATG13O75143 517 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 C4BPAP04003 597 aaKnown RBP23.36■■□□□ 1.33
CPSF7-208ENST00000450000 ARSAP15289 507 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 PFKLP17858 780 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 KRBA2Q6ZNG9 492 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 Q6ZS52 159 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 DCLK2Q8N568 766 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 GPR161Q8N6U8 529 aaKnown RBP23.36■■□□□ 1.33
CPSF7-208ENST00000450000 CCDC150Q8NCX0 1101 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 TMC2Q8TDI7 906 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 OSCP1Q8WVF1 389 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 NELL1Q92832 810 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 ZNF518BQ9C0D4 1074 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 DNAI2Q9GZS0 605 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 SMYD3Q9H7B4 428 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 VRTNQ9H8Y1 702 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 F5P12259 2224 aa23.36■■□□□ 1.33
CPSF7-208ENST00000450000 NUP210Q8TEM1 1887 aaPredicted RBP23.35■■□□□ 1.33
CPSF7-208ENST00000450000 PIK3CAP42336 1068 aa23.35■■□□□ 1.33
CPSF7-208ENST00000450000 CDH8P55286 799 aa23.35■■□□□ 1.33
CPSF7-208ENST00000450000 NOP14P78316 857 aaKnown RBP23.35■■□□□ 1.33
CPSF7-208ENST00000450000 CCINQ13939 588 aa23.35■■□□□ 1.33
CPSF7-208ENST00000450000 HEATR6Q6AI08 1181 aaKnown RBP23.35■■□□□ 1.33
CPSF7-208ENST00000450000 PLEKHO2Q8TD55 490 aa23.35■■□□□ 1.33
CPSF7-208ENST00000450000 TAF4BQ92750 862 aa23.35■■□□□ 1.33
CPSF7-208ENST00000450000 SLC22A12Q96S37 553 aa23.35■■□□□ 1.33
CPSF7-208ENST00000450000 GZF1Q9H116 711 aaPredicted RBP23.35■■□□□ 1.33
CPSF7-208ENST00000450000 ECT2Q9H8V3 914 aa23.35■■□□□ 1.33
CPSF7-208ENST00000450000 ARHGAP26Q9UNA1 814 aa23.35■■□□□ 1.33
CPSF7-208ENST00000450000 MAPK8IP1Q9UQF2 711 aa23.35■■□□□ 1.33
CPSF7-208ENST00000450000 WNT6Q9Y6F9 365 aa23.35■■□□□ 1.33
CPSF7-208ENST00000450000 USP34Q70CQ2 3546 aa23.35■■□□□ 1.33
CPSF7-208ENST00000450000 RIF1Q5UIP0 2472 aaKnown RBP23.34■■□□□ 1.33
CPSF7-208ENST00000450000 CLDN5O00501 218 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 IKBKBO14920 756 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 RHOBTB3O94955 611 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 ZNF202O95125 648 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 RTN3O95197 1032 aaPredicted RBP23.34■■□□□ 1.33
CPSF7-208ENST00000450000 PRR29P0C7W0 189 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 DRD1P21728 446 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 NR2F2P24468 414 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 YWHAQP27348 245 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 RAP1GAPP47736 663 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 USP46P62068 366 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 CLDN10P78369 228 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 TAF10Q12962 218 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 GAS6Q14393 721 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 ZNF77Q15935 545 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 NUP93Q8N1F7 819 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 TMEM174Q8WUU8 243 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 P2RY13Q9BPV8 354 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 B3GNT5Q9BYG0 378 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 GCNT4Q9P109 453 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 SLC8A2Q9UPR5 921 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 TRAF3IP3Q9Y228 551 aa23.34■■□□□ 1.33
CPSF7-208ENST00000450000 FAM186AA6NE01 2351 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 FAM237AA0A1B0GTK4 181 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 CHURC1-FNTBB4DL54 471 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 TRDMT1O14717 391 aaKnown RBP23.33■■□□□ 1.33
CPSF7-208ENST00000450000 NFATC1O95644 943 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 CNR2P34972 360 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 FNTBP49356 437 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 VAMP7P51809 220 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 DLG4P78352 724 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 DPYDQ12882 1025 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 USP4Q13107 963 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 SIM2Q14190 667 aaPredicted RBP23.33■■□□□ 1.33
CPSF7-208ENST00000450000 TMEM196Q5HYL7 178 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 INTS8Q75QN2 995 aaKnown RBP23.33■■□□□ 1.33
CPSF7-208ENST00000450000 CEP68Q76N32 757 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 LONP2Q86WA8 852 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 PDZD8Q8NEN9 1154 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 FBXO32Q969P5 355 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 TTLL2Q9BWV7 592 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 GDPD2Q9HCC8 539 aa23.33■■□□□ 1.33
CPSF7-208ENST00000450000 ZNF840PA6NDX5 716 aa23.32■■□□□ 1.32
CPSF7-208ENST00000450000 GJA4P35212 333 aa23.32■■□□□ 1.32
CPSF7-208ENST00000450000 GALK1P51570 392 aa23.32■■□□□ 1.32
CPSF7-208ENST00000450000 LPAL2Q16609 132 aa23.32■■□□□ 1.32
CPSF7-208ENST00000450000 ZACNQ401N2 412 aa23.32■■□□□ 1.32
CPSF7-208ENST00000450000 FBXO43Q4G163 708 aa23.32■■□□□ 1.32
CPSF7-208ENST00000450000 SV2AQ7L0J3 742 aa23.32■■□□□ 1.32
CPSF7-208ENST00000450000 CCDC26Q8TAB7 109 aa23.32■■□□□ 1.32
CPSF7-208ENST00000450000 CD101Q93033 1021 aa23.32■■□□□ 1.32
CPSF7-208ENST00000450000 SMARCD1Q96GM5 515 aa23.32■■□□□ 1.32
CPSF7-208ENST00000450000 MMRN2Q9H8L6 949 aa23.32■■□□□ 1.32
CPSF7-208ENST00000450000 DMAP1Q9NPF5 467 aaPredicted RBP23.32■■□□□ 1.32
CPSF7-208ENST00000450000 USP18Q9UMW8 372 aa23.32■■□□□ 1.32
CPSF7-208ENST00000450000 NME7Q9Y5B8 376 aa23.32■■□□□ 1.32
CPSF7-208ENST00000450000 MYO15AQ9UKN7 3530 aa23.32■■□□□ 1.32
CPSF7-208ENST00000450000 PATJQ8NI35 1801 aa23.31■■□□□ 1.32
CPSF7-208ENST00000450000 COL4A2P08572 1712 aa23.31■■□□□ 1.32
CPSF7-208ENST00000450000 LEFTY2O00292 366 aa23.31■■□□□ 1.32
CPSF7-208ENST00000450000 SLC9A3R1O14745 358 aaPredicted RBP23.31■■□□□ 1.32
CPSF7-208ENST00000450000 MAPK13O15264 365 aa23.31■■□□□ 1.32
CPSF7-208ENST00000450000 PAPSS2O95340 614 aaPredicted RBP23.31■■□□□ 1.32
CPSF7-208ENST00000450000 VNN1O95497 513 aa23.31■■□□□ 1.32
CPSF7-208ENST00000450000 MBL2P11226 248 aaPredicted RBP23.31■■□□□ 1.32
CPSF7-208ENST00000450000 TDGF1P13385 188 aa23.31■■□□□ 1.32
CPSF7-208ENST00000450000 PSMC2P35998 433 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms