RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 TTLL2Q9BWV7 592 aa18.48■□□□□ 0.55
CLTCL1-203ENST00000449918 EBF3Q9H4W6 596 aa18.48■□□□□ 0.55
CLTCL1-203ENST00000449918 SMYD3Q9H7B4 428 aa18.48■□□□□ 0.55
CLTCL1-203ENST00000449918 GCNT4Q9P109 453 aa18.48■□□□□ 0.55
CLTCL1-203ENST00000449918 MAPK8IP1Q9UQF2 711 aa18.48■□□□□ 0.55
CLTCL1-203ENST00000449918 COL4A2P08572 1712 aa18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 KRT13P13646 458 aa18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 CDH8P55286 799 aa18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 GRSF1Q12849 480 aaKnown RBP eCLIP18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 MTF1Q14872 753 aa18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 INTS8Q75QN2 995 aaKnown RBP18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 TTC16Q8NEE8 873 aa18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 SLC22A12Q96S37 553 aa18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 HINFPQ9BQA5 517 aa18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 B3GNT5Q9BYG0 378 aa18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 ZNF518BQ9C0D4 1074 aa18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 HPS4Q9NQG7 708 aa18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 RBM12Q9NTZ6 932 aaKnown RBP18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 DUS2Q9NX74 493 aaKnown RBP18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 RIF1Q5UIP0 2472 aaKnown RBP18.47■□□□□ 0.55
CLTCL1-203ENST00000449918 C2orf78A6NCI8 922 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 ZNF840PA6NDX5 716 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 TRIM21P19474 475 aaKnown RBP18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 PSMC2P35998 433 aaKnown RBP18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 PIK3CAP42336 1068 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 USP46P62068 366 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 ENPEPQ07075 957 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 ADAM9Q13443 819 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 TRIM68Q6AZZ1 485 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 SCARA5Q6ZMJ2 495 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 CPA6Q8N4T0 437 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 SUMF1Q8NBK3 374 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 OSCP1Q8WVF1 389 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 RUBCNQ92622 972 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 SLITRK1Q96PX8 696 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 MED10Q9BTT4 135 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 RMND1Q9NWS8 449 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 ARHGAP26Q9UNA1 814 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 VPS13AQ96RL7 3174 aa18.46■□□□□ 0.55
CLTCL1-203ENST00000449918 CLDN5O00501 218 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 LILRB5O75023 590 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 AKAP3O75969 853 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 RTN3O95197 1032 aaPredicted RBP18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 ABL1P00519 1130 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 ARSAP15289 507 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 TCF3P15923 654 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 RAP1GAPP47736 663 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 IFNAR2P48551 515 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 CCINQ13939 588 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 GAS6Q14393 721 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 ZNF77Q15935 545 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 FAM186BQ8IYM0 893 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 NUP93Q8N1F7 819 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 SH3RF2Q8TEC5 729 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 SECISBP2LQ93073 1101 aaKnown RBP18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 ATP2A3Q93084 1043 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 IMPG2Q9BZV3 1241 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 FAM186AA6NE01 2351 aa18.45■□□□□ 0.54
CLTCL1-203ENST00000449918 OTOL1A6NHN0 477 aaPredicted RBP18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 TRDMT1O14717 391 aaKnown RBP18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 ASS1P00966 412 aaKnown RBP18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 HLA-DRAP01903 254 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 TDGF1P13385 188 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 YWHAQP27348 245 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 CACNA2D1P54289 1103 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 SATB1Q01826 763 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 TAF10Q12962 218 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 USP4Q13107 963 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 NR1H3Q13133 447 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 TMEM196Q5HYL7 178 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 UNC93AQ86WB7 457 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 FMR1NBQ8N0W7 255 aaPredicted RBP18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 CCDC150Q8NCX0 1101 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 PDZD8Q8NEN9 1154 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 RIN3Q8TB24 985 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 SMARCD1Q96GM5 515 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 SDCBP2Q9H190 292 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 EPC1Q9H2F5 836 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 ECT2Q9H8V3 914 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 PATJQ8NI35 1801 aa18.44■□□□□ 0.54
CLTCL1-203ENST00000449918 PAPSS2O95340 614 aaPredicted RBP18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 GCLMP48507 274 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 SLC7A9P82251 487 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 EDRF1Q3B7T1 1238 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 WDR44Q5JSH3 913 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 C1orf220Q5T0J3 134 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 Q6ZS52 159 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 ACOT1Q86TX2 421 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 FAM35AQ86V20 835 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 CRYBG2Q8N1P7 616 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 KIAA1958Q8N8K9 716 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 OVCA2Q8WZ82 227 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 ELMO3Q96BJ8 720 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 KCNK16Q96T55 309 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 DNAI2Q9GZS0 605 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 DMAP1Q9NPF5 467 aaPredicted RBP18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 TMEM30AQ9NV96 361 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 HOOK1Q9UJC3 728 aaKnown RBP18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 WNT6Q9Y6F9 365 aa18.43■□□□□ 0.54
CLTCL1-203ENST00000449918 DMDP11532 3685 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms