RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 STRN3Q13033 797 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 USP4Q13107 963 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 MYBPC2Q14324 1141 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 KARSQ15046 597 aaKnown RBP10.71□□□□□ -0.69
LINC02561-201ENST00000449457 ZBTB6Q15916 424 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 ZNF77Q15935 545 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 GAB4Q2WGN9 574 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 C9orf57Q5W0N0 161 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 HAUS3Q68CZ6 603 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 ARMCX5Q6P1M9 558 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 SLC39A4Q6P5W5 647 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 C1orf186Q6ZWK4 172 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 PDZD3Q86UT5 571 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 ITIH5Q86UX2 942 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 C12orf40Q86WS4 652 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 EFCAB13Q8IY85 973 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 CAMKK1Q8N5S9 505 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 ALLCQ8N6M5 410 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 C4orf32Q8N8J7 132 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 ARL14EPQ8N8R7 260 aaPredicted RBP10.71□□□□□ -0.69
LINC02561-201ENST00000449457 USP33Q8TEY7 942 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 LRRC15Q8TF66 581 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 HNRNPLLQ8WVV9 542 aaKnown RBP10.71□□□□□ -0.69
LINC02561-201ENST00000449457 MMTAG2Q9BU76 263 aaKnown RBP10.71□□□□□ -0.69
LINC02561-201ENST00000449457 TM6SF1Q9BZW5 370 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 ANAPC1Q9H1A4 1944 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 TDP1Q9NUW8 608 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 LRWD1Q9UFC0 647 aa10.71□□□□□ -0.69
LINC02561-201ENST00000449457 UBQLN1Q9UMX0 589 aaKnown RBP10.71□□□□□ -0.69
LINC02561-201ENST00000449457 PI4KAP42356 2102 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 MYOFQ9NZM1 2061 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 PCDH15Q96QU1 1955 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 TMEM8BA6NDV4 472 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 K7EQS6 105 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 SGK1O00141 431 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 CLDN3O15551 220 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 KLF8O95600 359 aaPredicted RBP10.7□□□□□ -0.7
LINC02561-201ENST00000449457 TYMPP19971 482 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 CSRP1P21291 193 aaKnown RBP10.7□□□□□ -0.7
LINC02561-201ENST00000449457 DRD1P21728 446 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 SLC6A11P48066 632 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 IFNAR2P48551 515 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 TRIM29Q14134 588 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 SAFBQ15424 915 aaKnown RBP eCLIP10.7□□□□□ -0.7
LINC02561-201ENST00000449457 EML3Q32P44 896 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 CC2D1AQ6P1N0 951 aaPredicted RBP10.7□□□□□ -0.7
LINC02561-201ENST00000449457 CPA6Q8N4T0 437 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 SH3RF2Q8TEC5 729 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 HMGB4Q8WW32 186 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 WASF1Q92558 559 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 COL26A1Q96A83 441 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 NEUROG3Q9Y4Z2 214 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 ASB3Q9Y575 518 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 PCDHB6Q9Y5E3 794 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 PLXNB3Q9ULL4 1909 aa10.7□□□□□ -0.7
LINC02561-201ENST00000449457 CYB561D2O14569 222 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 PRPF40AO75400 957 aaKnown RBP10.69□□□□□ -0.7
LINC02561-201ENST00000449457 CKMP06732 381 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 CYP2F1P24903 491 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 VARSP26640 1264 aaKnown RBP10.69□□□□□ -0.7
LINC02561-201ENST00000449457 WASP42768 502 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 ACOT2P49753 483 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 DHX8Q14562 1220 aaKnown RBP10.69□□□□□ -0.7
LINC02561-201ENST00000449457 USP39Q53GS9 565 aaKnown RBP10.69□□□□□ -0.7
LINC02561-201ENST00000449457 SPATA1Q5VX52 437 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 OSTM1Q86WC4 334 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 PROSER1Q86XN7 944 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 TXNDC5Q8NBS9 432 aaKnown RBP10.69□□□□□ -0.7
LINC02561-201ENST00000449457 ZSWIM2Q8NEG5 633 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 ACDQ96AP0 544 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 LRIG1Q96JA1 1093 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 DRC1Q96MC2 740 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 PNMA5Q96PV4 448 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 SLC6A17Q9H1V8 727 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 EBF1Q9UH73 591 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 MAFFQ9ULX9 164 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 RAXQ9Y2V3 346 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 MSRB2Q9Y3D2 182 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 PCNX2A6NKB5 2137 aa10.69□□□□□ -0.7
LINC02561-201ENST00000449457 CEP192Q8TEP8 1941 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 TCRBV21S2A2A0A5A6 115 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 ANKRD63C9JTQ0 380 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 K7ENM7 598 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 FGF19O95750 216 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 CAPNS1P04632 268 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 CLTAP09496 248 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 PLS3P13797 630 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 SLC19A1P41440 591 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 LIG4P49917 911 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 TMEM132DQ14C87 1099 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 PTPAQ15257 358 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 PIP4P1Q86T03 277 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 RASSF3Q86WH2 238 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 CCDC83Q8IWF9 413 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 PLPP7Q8NBV4 271 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 EHBP1Q8NDI1 1231 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 OSCP1Q8WVF1 389 aa10.68□□□□□ -0.7
LINC02561-201ENST00000449457 MRPS31Q92665 395 aaKnown RBP10.68□□□□□ -0.7
LINC02561-201ENST00000449457 CNOT6LQ96LI5 555 aaKnown RBP10.68□□□□□ -0.7
LINC02561-201ENST00000449457 NUSAP1Q9BXS6 441 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms