RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 DDX3XO00571 662 aaKnown RBP eCLIP7.7□□□□□ -1.18
LINC00349-201ENST00000448748 MSH4O15457 936 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 FOXD2O60548 495 aaPredicted RBP7.7□□□□□ -1.18
LINC00349-201ENST00000448748 JAK2O60674 1132 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 CAND2O75155 1236 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 PFKMP08237 780 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 SMIM10L2AP0DMW4 78 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 SMIM10L2BP0DMW5 78 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 SLC26A2P50443 739 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 ACTR2P61160 394 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 RABEP1Q15276 862 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 PTGISQ16647 500 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 ZC3H12BQ5HYM0 836 aaKnown RBP7.7□□□□□ -1.18
LINC00349-201ENST00000448748 MARCH8Q5T0T0 291 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 FAM109BQ6ICB4 259 aaPredicted RBP7.7□□□□□ -1.18
LINC00349-201ENST00000448748 PPP4R3AQ6IN85 833 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 PSRC1Q6PGN9 363 aaPredicted RBP7.7□□□□□ -1.18
LINC00349-201ENST00000448748 PLPPR4Q7Z2D5 763 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.7□□□□□ -1.18
LINC00349-201ENST00000448748 PROSER1Q86XN7 944 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 TMEM199Q8N511 208 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 C7orf31Q8N865 590 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 TBCKQ8TEA7 893 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 SH3RF2Q8TEC5 729 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 SEPT1Q8WYJ6 367 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 HERVK_113Q902F9 699 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 RIT2Q99578 217 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 LLPHQ9BRT6 129 aaKnown RBP7.7□□□□□ -1.18
LINC00349-201ENST00000448748 CD244Q9BZW8 370 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 RNPEPQ9H4A4 650 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 KCNMB3Q9NPA1 279 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 TBC1D22BQ9NU19 505 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 ERAP1Q9NZ08 941 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 ORC3Q9UBD5 711 aaPredicted RBP7.7□□□□□ -1.18
LINC00349-201ENST00000448748 ZNF215Q9UL58 517 aaPredicted RBP7.7□□□□□ -1.18
LINC00349-201ENST00000448748 NRCAMQ92823 1304 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 TRIOO75962 3097 aa7.7□□□□□ -1.18
LINC00349-201ENST00000448748 C5orf42Q9H799 3197 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 WNT9AO14904 365 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 PRICKLE3O43900 615 aaPredicted RBP7.69□□□□□ -1.18
LINC00349-201ENST00000448748 PSMD10O75832 226 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 PARNO95453 639 aaKnown RBP7.69□□□□□ -1.18
LINC00349-201ENST00000448748 CRTAMO95727 393 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 MMP1P03956 469 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 IQCF3P0C7M6 154 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 PYGMP11217 842 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 CKBP12277 381 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 EPHA5P54756 1037 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 NLRP5P59047 1200 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 SMAD3P84022 425 aaKnown RBP7.69□□□□□ -1.18
LINC00349-201ENST00000448748 BFSP2Q13515 415 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 PAN2Q504Q3 1202 aaKnown RBP7.69□□□□□ -1.18
LINC00349-201ENST00000448748 FAM47CQ5HY64 1035 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 EARS2Q5JPH6 523 aaKnown RBP7.69□□□□□ -1.18
LINC00349-201ENST00000448748 PLA2G4DQ86XP0 818 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 CCDC60Q8IWA6 550 aaPredicted RBP7.69□□□□□ -1.18
LINC00349-201ENST00000448748 SMAP1Q8IYB5 467 aaPredicted RBP7.69□□□□□ -1.18
LINC00349-201ENST00000448748 LILRB2Q8N423 598 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 THAP3Q8WTV1 239 aaPredicted RBP7.69□□□□□ -1.18
LINC00349-201ENST00000448748 WASF1Q92558 559 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 FBXW5Q969U6 566 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 ZSCAN31Q96LW9 406 aaPredicted RBP7.69□□□□□ -1.18
LINC00349-201ENST00000448748 CLIC6Q96NY7 704 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 TMEM209Q96SK2 561 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 SDF4Q9BRK5 362 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 SMARCAD1Q9H4L7 1026 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 NDOR1Q9UHB4 597 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 CROTQ9UKG9 612 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 KCNJ14Q9UNX9 436 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 NUB1Q9Y5A7 615 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 DUSP10Q9Y6W6 482 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 TTC3P53804 2025 aa7.69□□□□□ -1.18
LINC00349-201ENST00000448748 C17orf102A2RUQ5 167 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 B8ZZF3 427 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 SLC37A4O43826 429 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 NBNO60934 754 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 DTNBO60941 627 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 TDP2O95551 362 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 SRGAP2CP0DJJ0 459 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 GCFC2P16383 781 aaKnown RBP7.68□□□□□ -1.18
LINC00349-201ENST00000448748 FAHP16930 419 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 ZNF28P17035 718 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 MGAT3Q09327 533 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 BMS1Q14692 1282 aaKnown RBP7.68□□□□□ -1.18
LINC00349-201ENST00000448748 PLCB4Q15147 1175 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 NONOQ15233 471 aaKnown RBP eCLIP7.68□□□□□ -1.18
LINC00349-201ENST00000448748 PRR16Q569H4 304 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 C2orf27AQ580R0 203 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 ZNF365Q70YC5 407 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 LRRC8DQ7L1W4 858 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 FERMT3Q86UX7 667 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 ZSWIM2Q8NEG5 633 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 RDM1Q8NG50 284 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 CXorf38Q8TB03 319 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 DDX1Q92499 740 aaKnown RBP7.68□□□□□ -1.18
LINC00349-201ENST00000448748 SCLYQ96I15 445 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 ZNF577Q9BSK1 485 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 CATSPERZQ9NTU4 200 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 CBLCQ9ULV8 474 aa7.68□□□□□ -1.18
LINC00349-201ENST00000448748 COL1A2P08123 1366 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms