RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 VAMP7P51809 220 aa20.97■□□□□ 0.95
VCP-203ENST00000448530 CDH8P55286 799 aa20.97■□□□□ 0.95
VCP-203ENST00000448530 NUCB2P80303 420 aa20.97■□□□□ 0.95
VCP-203ENST00000448530 MTF1Q14872 753 aa20.97■□□□□ 0.95
VCP-203ENST00000448530 ZACNQ401N2 412 aa20.97■□□□□ 0.95
VCP-203ENST00000448530 TXNDC11Q6PKC3 985 aa20.97■□□□□ 0.95
VCP-203ENST00000448530 GUF1Q8N442 669 aaKnown RBP20.97■□□□□ 0.95
VCP-203ENST00000448530 SPEM1Q8N4L4 309 aa20.97■□□□□ 0.95
VCP-203ENST00000448530 ARL14EPQ8N8R7 260 aaPredicted RBP20.97■□□□□ 0.95
VCP-203ENST00000448530 TAF4BQ92750 862 aa20.97■□□□□ 0.95
VCP-203ENST00000448530 MED10Q9BTT4 135 aa20.97■□□□□ 0.95
VCP-203ENST00000448530 RBM12Q9NTZ6 932 aaKnown RBP20.97■□□□□ 0.95
VCP-203ENST00000448530 NME7Q9Y5B8 376 aa20.97■□□□□ 0.95
VCP-203ENST00000448530 WDR87Q6ZQQ6 2873 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 C2orf78A6NCI8 922 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 MAPK13O15264 365 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 VNN1O95497 513 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 TRIM21P19474 475 aaKnown RBP20.96■□□□□ 0.95
VCP-203ENST00000448530 PIK3CAP42336 1068 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 RAP1GAPP47736 663 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 PPP3CCP48454 512 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 NOP14P78316 857 aaKnown RBP20.96■□□□□ 0.95
VCP-203ENST00000448530 TRIM68Q6AZZ1 485 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 INTS8Q75QN2 995 aaKnown RBP20.96■□□□□ 0.95
VCP-203ENST00000448530 SV2AQ7L0J3 742 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 CPA6Q8N4T0 437 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 ZBTB44Q8NCP5 570 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 EXOC4Q96A65 974 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 SLITRK1Q96PX8 696 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 B3GNT5Q9BYG0 378 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 IMPG2Q9BZV3 1241 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 ZNF518BQ9C0D4 1074 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 DUS2Q9NX74 493 aaKnown RBP20.96■□□□□ 0.95
VCP-203ENST00000448530 CFAP54Q96N23 3096 aa20.96■□□□□ 0.95
VCP-203ENST00000448530 CLDN5O00501 218 aa20.95■□□□□ 0.94
VCP-203ENST00000448530 ABL1P00519 1130 aa20.95■□□□□ 0.94
VCP-203ENST00000448530 PFKLP17858 780 aa20.95■□□□□ 0.94
VCP-203ENST00000448530 IFNAR2P48551 515 aa20.95■□□□□ 0.94
VCP-203ENST00000448530 USP46P62068 366 aa20.95■□□□□ 0.94
VCP-203ENST00000448530 NFIL3Q16649 462 aa20.95■□□□□ 0.94
VCP-203ENST00000448530 FAM186BQ8IYM0 893 aa20.95■□□□□ 0.94
VCP-203ENST00000448530 SYNPOQ8N3V7 929 aa20.95■□□□□ 0.94
VCP-203ENST00000448530 RUBCNQ92622 972 aa20.95■□□□□ 0.94
VCP-203ENST00000448530 SLC22A12Q96S37 553 aa20.95■□□□□ 0.94
VCP-203ENST00000448530 TTLL2Q9BWV7 592 aa20.95■□□□□ 0.94
VCP-203ENST00000448530 HPS4Q9NQG7 708 aa20.95■□□□□ 0.94
VCP-203ENST00000448530 RMND1Q9NWS8 449 aa20.95■□□□□ 0.94
VCP-203ENST00000448530 GCNT4Q9P109 453 aa20.95■□□□□ 0.94
VCP-203ENST00000448530 HELZP42694 1942 aaKnown RBP20.94■□□□□ 0.94
VCP-203ENST00000448530 EP300Q09472 2414 aaPredicted RBP20.94■□□□□ 0.94
VCP-203ENST00000448530 GVINP1Q7Z2Y8 2422 aa20.94■□□□□ 0.94
VCP-203ENST00000448530 ARSAP15289 507 aa20.94■□□□□ 0.94
VCP-203ENST00000448530 PSMC2P35998 433 aaKnown RBP20.94■□□□□ 0.94
VCP-203ENST00000448530 GRSF1Q12849 480 aaKnown RBP eCLIP20.94■□□□□ 0.94
VCP-203ENST00000448530 IFRD2Q12894 506 aaPredicted RBP20.94■□□□□ 0.94
VCP-203ENST00000448530 ADAM9Q13443 819 aa20.94■□□□□ 0.94
VCP-203ENST00000448530 ZNF77Q15935 545 aa20.94■□□□□ 0.94
VCP-203ENST00000448530 SH3RF2Q8TEC5 729 aa20.94■□□□□ 0.94
VCP-203ENST00000448530 NELL1Q92832 810 aa20.94■□□□□ 0.94
VCP-203ENST00000448530 ATP2A3Q93084 1043 aa20.94■□□□□ 0.94
VCP-203ENST00000448530 ELMO3Q96BJ8 720 aa20.94■□□□□ 0.94
VCP-203ENST00000448530 ARHGAP26Q9UNA1 814 aa20.94■□□□□ 0.94
VCP-203ENST00000448530 AKAP3O75969 853 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 RTN3O95197 1032 aaPredicted RBP20.93■□□□□ 0.94
VCP-203ENST00000448530 HLA-DRAP01903 254 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 SATB1Q01826 763 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 USP4Q13107 963 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 NR1H3Q13133 447 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 Q6ZS52 159 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 ACOT1Q86TX2 421 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 FAM35AQ86V20 835 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 NUP93Q8N1F7 819 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 CCDC150Q8NCX0 1101 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 RIN3Q8TB24 985 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 OSCP1Q8WVF1 389 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 SECISBP2LQ93073 1101 aaKnown RBP20.93■□□□□ 0.94
VCP-203ENST00000448530 SMARCD1Q96GM5 515 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 SDCBP2Q9H190 292 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 NCDNQ9UBB6 729 aa20.93■□□□□ 0.94
VCP-203ENST00000448530 MYH10P35580 1976 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 ZNF840PA6NDX5 716 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 ASS1P00966 412 aaKnown RBP20.92■□□□□ 0.94
VCP-203ENST00000448530 TRIM49P0CI25 452 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 TRIM49CP0CI26 452 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 YWHAQP27348 245 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 CACNA2D1P54289 1103 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 TAF10Q12962 218 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 PNOCQ13519 176 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 CCINQ13939 588 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 GAS6Q14393 721 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 SUMF1Q8NBK3 374 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 PDZD8Q8NEN9 1154 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 DNAI2Q9GZS0 605 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 MMRN2Q9H8L6 949 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 DMAP1Q9NPF5 467 aaPredicted RBP20.92■□□□□ 0.94
VCP-203ENST00000448530 HOOK1Q9UJC3 728 aaKnown RBP20.92■□□□□ 0.94
VCP-203ENST00000448530 RAB23Q9ULC3 237 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 WNT6Q9Y6F9 365 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 ZNF292O60281 2723 aa20.92■□□□□ 0.94
VCP-203ENST00000448530 OTOL1A6NHN0 477 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms