RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CCDC130P13994 396 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 PDGFRAP16234 1089 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 LMO2P25791 158 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 ADORA2BP29275 332 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 CDH5P33151 784 aaPredicted RBP15.53■□□□□ 0.08
SF1-211ENST00000448404 CTCFP49711 727 aaPredicted RBP15.53■□□□□ 0.08
SF1-211ENST00000448404 CDH6P55285 790 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 PKN2Q16513 984 aaKnown RBP15.53■□□□□ 0.08
SF1-211ENST00000448404 C6orf89Q6UWU4 347 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 USP50Q70EL3 339 aaPredicted RBP15.53■□□□□ 0.08
SF1-211ENST00000448404 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.53■□□□□ 0.082e-12■□□□□ 10.2
SF1-211ENST00000448404 MAML3Q96JK9 1138 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 TMPRSS4Q9NRS4 437 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 FLRT1Q9NZU1 646 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 USP18Q9UMW8 372 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 HEY1Q9Y5J3 304 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 DNALI1O14645 258 aaPredicted RBP15.53■□□□□ 0.08
SF1-211ENST00000448404 GAS2O43903 313 aaKnown RBP15.53■□□□□ 0.08
SF1-211ENST00000448404 TMEM63AO94886 807 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 MYO1EQ12965 1108 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 GRM1Q13255 1194 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 CTU1Q7Z7A3 348 aaKnown RBP15.53■□□□□ 0.08
SF1-211ENST00000448404 CACNA2D3Q8IZS8 1091 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 MAIP1Q8WWC4 291 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 DNAJB3Q8WWF6 145 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 RUNDC3BQ96NL0 473 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 EXOC1LA0A1B0GW35 172 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 MEIS3P2A8K0S8 358 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 H0YHG0 523 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 PAEPP09466 180 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 RPL22P35268 128 aaKnown RBP15.53■□□□□ 0.08
SF1-211ENST00000448404 BASP1P80723 227 aaKnown RBP15.53■□□□□ 0.08
SF1-211ENST00000448404 FAM133BQ5BKY9 247 aaKnown RBP15.53■□□□□ 0.08
SF1-211ENST00000448404 TNFAIP8L3Q5GJ75 292 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 PPP6R3Q5H9R7 873 aaPredicted RBP15.53■□□□□ 0.08
SF1-211ENST00000448404 ZNF484Q5JVG2 852 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 CATSPER4Q7RTX7 472 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 IGDCC3Q8IVU1 814 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 MFHAS1Q9Y4C4 1052 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 MRPL42Q9Y6G3 142 aaKnown RBP15.53■□□□□ 0.08
SF1-211ENST00000448404 SYNJ2BP-COX16A0A087WUM0 186 aa15.52■□□□□ 0.08
SF1-211ENST00000448404 GOLGA6L7A0A1B0GV03 622 aa15.52■□□□□ 0.08
SF1-211ENST00000448404 RASA4BC9J798 803 aa15.52■□□□□ 0.08
SF1-211ENST00000448404 RASA4O43374 803 aa15.52■□□□□ 0.08
SF1-211ENST00000448404 MCF2P10911 925 aa15.52■□□□□ 0.08
SF1-211ENST00000448404 MAN1A1P33908 653 aa15.52■□□□□ 0.08
SF1-211ENST00000448404 SLC26A2P50443 739 aa15.52■□□□□ 0.08
SF1-211ENST00000448404 ACVR2BQ13705 512 aa15.52■□□□□ 0.08
SF1-211ENST00000448404 SURF1Q15526 300 aa15.52■□□□□ 0.08
SF1-211ENST00000448404 RNASEH2BQ5TBB1 312 aaKnown RBP15.52■□□□□ 0.08
SF1-211ENST00000448404 GKAP1Q5VSY0 366 aaPredicted RBP15.52■□□□□ 0.08
SF1-211ENST00000448404 NUGGCQ68CJ6 796 aa15.52■□□□□ 0.08
SF1-211ENST00000448404 CYP4V2Q6ZWL3 525 aaPredicted RBP15.52■□□□□ 0.08
SF1-211ENST00000448404 OR6B3Q8NGW1 331 aa15.52■□□□□ 0.08
SF1-211ENST00000448404 SLC35B2Q8TB61 432 aa15.52■□□□□ 0.08
SF1-211ENST00000448404 ALG13Q9NP73 1137 aaKnown RBP15.52■□□□□ 0.08
SF1-211ENST00000448404 ABCF3Q9NUQ8 709 aa15.52■□□□□ 0.08
SF1-211ENST00000448404 COX16Q9P0S2 106 aa15.52■□□□□ 0.08
SF1-211ENST00000448404 TPX2Q9ULW0 747 aaKnown RBP15.52■□□□□ 0.08
SF1-211ENST00000448404 A0A1B0GUA9 196 aa15.52■□□□□ 0.07
SF1-211ENST00000448404 SPTLC1O15269 473 aa15.52■□□□□ 0.07
SF1-211ENST00000448404 IL18RAPO95256 599 aa15.52■□□□□ 0.07
SF1-211ENST00000448404 GBP1P32455 592 aa15.52■□□□□ 0.07
SF1-211ENST00000448404 CETN2P41208 172 aa15.52■□□□□ 0.07
SF1-211ENST00000448404 GPR162Q16538 588 aa15.52■□□□□ 0.07
SF1-211ENST00000448404 BBS9Q3SYG4 887 aa15.52■□□□□ 0.07
SF1-211ENST00000448404 ZCCHC9Q8N567 271 aaKnown RBP15.52■□□□□ 0.07
SF1-211ENST00000448404 SPATA18Q8TC71 538 aa15.52■□□□□ 0.07
SF1-211ENST00000448404 CPT1BQ92523 772 aa15.52■□□□□ 0.07
SF1-211ENST00000448404 RBP3P10745 1247 aa15.51■□□□□ 0.07
SF1-211ENST00000448404 AFF1P51825 1210 aaKnown RBP15.51■□□□□ 0.07
SF1-211ENST00000448404 GPX6P59796 221 aa15.51■□□□□ 0.07
SF1-211ENST00000448404 SPDYCQ5MJ68 293 aa15.51■□□□□ 0.07
SF1-211ENST00000448404 PRCCQ92733 491 aaPredicted RBP15.51■□□□□ 0.07
SF1-211ENST00000448404 CNOT10Q9H9A5 744 aaKnown RBP15.51■□□□□ 0.07
SF1-211ENST00000448404 PIH1D1Q9NWS0 290 aaKnown RBP15.51■□□□□ 0.07
SF1-211ENST00000448404 TRIP12Q14669 1992 aaPredicted RBP15.51■□□□□ 0.07
SF1-211ENST00000448404 TREHO43280 583 aa15.51■□□□□ 0.07
SF1-211ENST00000448404 TRUB2O95900 331 aaKnown RBP15.51■□□□□ 0.07
SF1-211ENST00000448404 FGFR1P11362 822 aa15.51■□□□□ 0.07
SF1-211ENST00000448404 YARSP54577 528 aaKnown RBP15.51■□□□□ 0.07
SF1-211ENST00000448404 EIF3EP60228 445 aaKnown RBP15.51■□□□□ 0.07
SF1-211ENST00000448404 CCDC121Q6ZUS5 278 aa15.51■□□□□ 0.07
SF1-211ENST00000448404 TINF2Q9BSI4 451 aa15.51■□□□□ 0.07
SF1-211ENST00000448404 BARX2Q9UMQ3 279 aaPredicted RBP15.51■□□□□ 0.07
SF1-211ENST00000448404 SUFUQ9UMX1 484 aa15.51■□□□□ 0.07
SF1-211ENST00000448404 WDR91A4D1P6 747 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 RECQL4O94761 1208 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 LCP1P13796 627 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 ACAT1P24752 427 aaKnown RBP15.5■□□□□ 0.07
SF1-211ENST00000448404 FOXN2P32314 431 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 OLFML2BQ68BL8 750 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 MFSD5Q6N075 450 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 RSAD2Q8WXG1 361 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 ZNF518BQ9C0D4 1074 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 LHX5Q9H2C1 402 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 SLCO1B3Q9NPD5 702 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 SLC5A4Q9NY91 659 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 GRID1Q9ULK0 1009 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 CHMP2BQ9UQN3 213 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms