RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 LRP3O75074 770 aa30.19■■■□□ 2.42
CBX4-202ENST00000448310 ZSCAN22P10073 491 aaPredicted RBP30.19■■■□□ 2.42
CBX4-202ENST00000448310 CUL4BQ13620 913 aa30.19■■■□□ 2.42
CBX4-202ENST00000448310 EML3Q32P44 896 aa30.19■■■□□ 2.42
CBX4-202ENST00000448310 WDR72Q3MJ13 1102 aa30.19■■■□□ 2.42
CBX4-202ENST00000448310 DENND5BQ6ZUT9 1274 aa30.19■■■□□ 2.42
CBX4-202ENST00000448310 HS2ST1Q7LGA3 356 aa30.19■■■□□ 2.42
CBX4-202ENST00000448310 GRAMD1CQ8IYS0 662 aa30.19■■■□□ 2.42
CBX4-202ENST00000448310 ATP2A3Q93084 1043 aa30.19■■■□□ 2.42
CBX4-202ENST00000448310 LINC00597Q9H2U6 94 aa30.19■■■□□ 2.42
CBX4-202ENST00000448310 DPEP3Q9H4B8 488 aa30.19■■■□□ 2.42
CBX4-202ENST00000448310 ATG13O75143 517 aa30.18■■■□□ 2.42
CBX4-202ENST00000448310 F13A1P00488 732 aa30.18■■■□□ 2.42
CBX4-202ENST00000448310 DRD1P21728 446 aa30.18■■■□□ 2.42
CBX4-202ENST00000448310 ME1P48163 572 aa30.18■■■□□ 2.42
CBX4-202ENST00000448310 TNNC1P63316 161 aa30.18■■■□□ 2.42
CBX4-202ENST00000448310 PRR23CQ6ZRP0 262 aa30.18■■■□□ 2.42
CBX4-202ENST00000448310 EZH1Q92800 747 aaPredicted RBP30.18■■■□□ 2.42
CBX4-202ENST00000448310 RTKNQ9BST9 563 aa30.18■■■□□ 2.42
CBX4-202ENST00000448310 ARHGAP26Q9UNA1 814 aa30.18■■■□□ 2.42
CBX4-202ENST00000448310 LOC105378220A0A1B0GUY1 285 aaPredicted RBP30.17■■■□□ 2.42
CBX4-202ENST00000448310 F8VP50 259 aa30.17■■■□□ 2.42
CBX4-202ENST00000448310 TACC1O75410 805 aa30.17■■■□□ 2.42
CBX4-202ENST00000448310 CASP4P49662 377 aa30.17■■■□□ 2.42
CBX4-202ENST00000448310 CACNA2D1P54289 1103 aa30.17■■■□□ 2.42
CBX4-202ENST00000448310 MYL6P60660 151 aa30.17■■■□□ 2.42
CBX4-202ENST00000448310 ZXDBP98169 803 aa30.17■■■□□ 2.42
CBX4-202ENST00000448310 CSRP2Q16527 193 aa30.17■■■□□ 2.42
CBX4-202ENST00000448310 BMT2Q1RMZ1 405 aa30.17■■■□□ 2.42
CBX4-202ENST00000448310 GAB3Q8WWW8 586 aa30.17■■■□□ 2.42
CBX4-202ENST00000448310 CD101Q93033 1021 aa30.17■■■□□ 2.42
CBX4-202ENST00000448310 HHIPQ96QV1 700 aa30.17■■■□□ 2.42
CBX4-202ENST00000448310 FAM13BQ9NYF5 915 aa30.17■■■□□ 2.42
CBX4-202ENST00000448310 TRPM5Q9NZQ8 1165 aa30.17■■■□□ 2.42
CBX4-202ENST00000448310 NXF1Q9UBU9 619 aaKnown RBP30.17■■■□□ 2.42
CBX4-202ENST00000448310 TRIM66O15016 1216 aa30.16■■■□□ 2.42
CBX4-202ENST00000448310 RPP40O75818 363 aaKnown RBP30.16■■■□□ 2.42
CBX4-202ENST00000448310 SNRPFP62306 86 aaKnown RBP30.16■■■□□ 2.42
CBX4-202ENST00000448310 TRPC3Q13507 836 aa30.16■■■□□ 2.42
CBX4-202ENST00000448310 PKP1Q13835 747 aa30.16■■■□□ 2.42
CBX4-202ENST00000448310 RESP18Q5W5W9 173 aa30.16■■■□□ 2.42
CBX4-202ENST00000448310 RPLP0P6Q8NHW5 317 aa30.16■■■□□ 2.42
CBX4-202ENST00000448310 PLEKHO2Q8TD55 490 aa30.16■■■□□ 2.42
CBX4-202ENST00000448310 TTLL2Q9BWV7 592 aa30.16■■■□□ 2.42
CBX4-202ENST00000448310 TMEM30AQ9NV96 361 aa30.16■■■□□ 2.42
CBX4-202ENST00000448310 AXIN1O15169 862 aa30.15■■■□□ 2.42
CBX4-202ENST00000448310 GDF9O60383 454 aa30.15■■■□□ 2.42
CBX4-202ENST00000448310 HSP90AA1P07900 732 aaKnown RBP30.15■■■□□ 2.42
CBX4-202ENST00000448310 PTPN1P18031 435 aaKnown RBP30.15■■■□□ 2.42
CBX4-202ENST00000448310 PSMD2Q13200 908 aa30.15■■■□□ 2.42
CBX4-202ENST00000448310 HSCBQ8IWL3 235 aa30.15■■■□□ 2.42
CBX4-202ENST00000448310 NETO1Q8TDF5 533 aa30.15■■■□□ 2.42
CBX4-202ENST00000448310 CEP295NLQ96MC4 621 aa30.15■■■□□ 2.42
CBX4-202ENST00000448310 ZNF518BQ9C0D4 1074 aa30.15■■■□□ 2.42
CBX4-202ENST00000448310 PVALEFA0A1B0GWK0 134 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 LEFTY2O00292 366 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 CLDN5O00501 218 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 EXOC3O60645 756 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 ABL1P00519 1130 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 CCDC192P0DO97 292 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 TCF3P15923 654 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 IFRD2Q12894 506 aaPredicted RBP30.14■■■□□ 2.42
CBX4-202ENST00000448310 CCDC6Q16204 474 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 KNOP1Q1ED39 458 aaKnown RBP30.14■■■□□ 2.42
CBX4-202ENST00000448310 FBXO43Q4G163 708 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 KBTBD6Q86V97 674 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 C12orf56Q8IXR9 622 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 EXOC4Q96A65 974 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 ELMO3Q96BJ8 720 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 C8orf48Q96LL4 319 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 XYLT2Q9H1B5 865 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 MYOFQ9NZM1 2061 aa30.14■■■□□ 2.42
CBX4-202ENST00000448310 CCDC163A0A0D9SF12 145 aa30.13■■■□□ 2.41
CBX4-202ENST00000448310 ZNF840PA6NDX5 716 aa30.13■■■□□ 2.41
CBX4-202ENST00000448310 A8MXQ7 604 aa30.13■■■□□ 2.41
CBX4-202ENST00000448310 PHACTR2O75167 634 aa30.13■■■□□ 2.41
CBX4-202ENST00000448310 PDE6CP51160 858 aa30.13■■■□□ 2.41
CBX4-202ENST00000448310 NOP14P78316 857 aaKnown RBP30.13■■■□□ 2.41
CBX4-202ENST00000448310 SPRYD3Q8NCJ5 442 aa30.13■■■□□ 2.41
CBX4-202ENST00000448310 B3GNT5Q9BYG0 378 aa30.13■■■□□ 2.41
CBX4-202ENST00000448310 RNF38Q9H0F5 515 aa30.13■■■□□ 2.41
CBX4-202ENST00000448310 ARRDC1-AS1Q9H2J1 176 aa30.13■■■□□ 2.41
CBX4-202ENST00000448310 SERTAD1Q9UHV2 236 aa30.13■■■□□ 2.41
CBX4-202ENST00000448310 SCAMP3O14828 347 aaKnown RBP30.12■■■□□ 2.41
CBX4-202ENST00000448310 CLSTN1O94985 981 aa30.12■■■□□ 2.41
CBX4-202ENST00000448310 DNM1Q05193 864 aaKnown RBP30.12■■■□□ 2.41
CBX4-202ENST00000448310 TAF10Q12962 218 aa30.12■■■□□ 2.41
CBX4-202ENST00000448310 NR1H3Q13133 447 aa30.12■■■□□ 2.41
CBX4-202ENST00000448310 CACNA2D4Q7Z3S7 1137 aa30.12■■■□□ 2.41
CBX4-202ENST00000448310 B3GALNT2Q8NCR0 500 aa30.12■■■□□ 2.41
CBX4-202ENST00000448310 ELOVL4Q9GZR5 314 aa30.12■■■□□ 2.41
CBX4-202ENST00000448310 SMYD3Q9H7B4 428 aa30.12■■■□□ 2.41
CBX4-202ENST00000448310 SMPD4Q9NXE4 827 aa30.12■■■□□ 2.41
CBX4-202ENST00000448310 EHD2Q9NZN4 543 aa30.12■■■□□ 2.41
CBX4-202ENST00000448310 CGNQ9P2M7 1197 aaKnown RBP30.12■■■□□ 2.41
CBX4-202ENST00000448310 SLC30A4O14863 429 aa30.11■■■□□ 2.41
CBX4-202ENST00000448310 KLRC4O43908 158 aa30.11■■■□□ 2.41
CBX4-202ENST00000448310 NFATC1O95644 943 aa30.11■■■□□ 2.41
CBX4-202ENST00000448310 STAU1O95793 577 aaKnown RBP30.11■■■□□ 2.41
CBX4-202ENST00000448310 FAM163BP0C2L3 166 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms