RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 DFFAO00273 331 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 SNRPAP09012 282 aaKnown RBP9.24□□□□□ -0.93
NIPBL-202ENST00000448238 NFKB1P19838 968 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 CDH3P22223 829 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 RC3H1Q5TC82 1133 aaKnown RBP9.24□□□□□ -0.93
NIPBL-202ENST00000448238 ANO7Q6IWH7 933 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 PACS1Q6VY07 963 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 SCUBE1Q8IWY4 988 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 STARD8Q92502 1023 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 UGT2B28Q9BY64 529 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 SOWAHDA6NJG2 315 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 CES2O00748 559 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 ERVK-10P10266 1014 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 GRB14Q14449 540 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 TYSND1Q2T9J0 566 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 Q4G0T1 1027 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 CIDECQ96AQ7 238 aaPredicted RBP9.24□□□□□ -0.93
NIPBL-202ENST00000448238 BHLHE41Q9C0J9 482 aaPredicted RBP9.24□□□□□ -0.93
NIPBL-202ENST00000448238 CHORDC1Q9UHD1 332 aaPredicted RBP9.24□□□□□ -0.93
NIPBL-202ENST00000448238 ADAMTS1Q9UHI8 967 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 GRIP1Q9Y3R0 1128 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 PCDHGB3Q9Y5G1 929 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 ARHGAP31Q2M1Z3 1444 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 GDF11O95390 407 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 IFNA6P05013 189 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 CHRNGP07510 517 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 CES1P23141 567 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 RGS7P49802 495 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 IL2P60568 153 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 GFPT1Q06210 699 aaPredicted RBP9.24□□□□□ -0.93
NIPBL-202ENST00000448238 TOP3AQ13472 1001 aaPredicted RBP9.24□□□□□ -0.93
NIPBL-202ENST00000448238 TRAPPC3LQ5T215 181 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 PID1Q7Z2X4 250 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 ZNF605Q86T29 641 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 EMC1Q8N766 993 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 ARL10Q8N8L6 244 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 FAM167AQ96KS9 214 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 IL1RL2Q9HB29 575 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 POLR3EQ9NVU0 708 aa9.24□□□□□ -0.93
NIPBL-202ENST00000448238 FBXW10Q5XX13 1052 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 B3GNT6Q6ZMB0 384 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 RASGEF1AQ8N9B8 481 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 ZNF473Q8WTR7 871 aaKnown RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 DDX17Q92841 729 aaKnown RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 C9orf16Q9BUW7 83 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 ARHGAP28Q9P2N2 729 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 FPGT-TNNI3KV9GXZ4 949 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 FAM25EA8MYX2 175 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 H3BN98 237 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 EYA2O00167 538 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 PLOD3O60568 738 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 GADD45BO75293 160 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 RGS6P49758 472 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 TPI1P60174 286 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 ACAP2Q15057 778 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 PRR5LQ6MZQ0 368 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 DAW1Q8N136 415 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 FANCBQ8NB91 859 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 ARHGEF26Q96DR7 871 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 TMEM63CQ9P1W3 806 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 VPS51Q9UID3 782 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 CHKBQ9Y259 395 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 SNX13Q9Y5W8 968 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 V9GYQ6 96 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 FAM170AA1A519 330 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 PGRMC2O15173 223 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 RGS14O43566 566 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 AKAP8O43823 692 aaKnown RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 ABCB5Q2M3G0 1257 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 AKAP4Q5JQC9 854 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 C11orf74Q86VG3 221 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 AADATQ8N5Z0 425 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 KBTBD8Q8NFY9 601 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 ZNF564Q8TBZ8 553 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 ZNF644Q9H582 1327 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 SLC33A1O00400 549 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 TRAPPC3O43617 180 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 NOL4O94818 638 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 PRH1P02810 166 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 IL18R1Q13478 541 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 VSTM4Q8IW00 320 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 ATXN7L3BQ96GX2 97 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 EMILIN3Q9NT22 766 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 MAP1BP46821 2468 aaKnown RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 NCKAP5LQ9HCH0 1330 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 PRG2P13727 222 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 CALB2P22676 271 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 ATP5F1P24539 256 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-202ENST00000448238 MYL9P24844 172 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 MDH1BQ5I0G3 518 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 PDXDC2PQ6P474 469 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 CHRDL2Q6WN34 429 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 SULF1Q8IWU6 871 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 SLC35C2Q9NQQ7 365 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 TBC1D24Q9ULP9 559 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 ZNF232Q9UNY5 417 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 SH3TC1Q8TE82 1336 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 TRIM64A6NGJ6 449 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 SAGE2PA6NJ88 616 aa9.23□□□□□ -0.93
NIPBL-202ENST00000448238 E7EWF7 191 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms