RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 VPS16Q9H269 839 aa12.64□□□□□ -0.39
RFC4-208ENST00000447345 TRPC7Q9HCX4 862 aa12.64□□□□□ -0.39
RFC4-208ENST00000447345 GDE1Q9NZC3 331 aa12.64□□□□□ -0.39
RFC4-208ENST00000447345 IGSF9Q9P2J2 1179 aa12.64□□□□□ -0.39
RFC4-208ENST00000447345 ZFP37Q9Y6Q3 630 aaPredicted RBP12.64□□□□□ -0.39
RFC4-208ENST00000447345 COL4A2P08572 1712 aa12.64□□□□□ -0.39
RFC4-208ENST00000447345 MIA3Q5JRA6 1907 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 ANHXE9PGG2 379 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 KRT5P13647 590 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 ACO1P21399 889 aaKnown RBP12.63□□□□□ -0.39
RFC4-208ENST00000447345 FCARP24071 287 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 SLC5A3P53794 718 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 TDGQ13569 410 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 GRM2Q14416 872 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 KRT31Q15323 416 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 ARHGAP44Q17R89 818 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 GOLGA7BQ2TAP0 167 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 CLEC20AQ6ZU45 233 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 TMEM150AQ86TG1 271 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 RBBP8NLQ8NC74 664 aaPredicted RBP12.63□□□□□ -0.39
RFC4-208ENST00000447345 ZMIZ2Q8NF64 920 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 MRPS31Q92665 395 aaKnown RBP12.63□□□□□ -0.39
RFC4-208ENST00000447345 TRMT2BQ96GJ1 504 aaKnown RBP12.63□□□□□ -0.39
RFC4-208ENST00000447345 SPATA17Q96L03 361 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 ASB16Q96NS5 453 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 HNRNPABQ99729 332 aaKnown RBP12.63□□□□□ -0.39
RFC4-208ENST00000447345 SMOQ99835 787 aa12.63□□□□□ -0.39
RFC4-208ENST00000447345 UBE2TQ9NPD8 197 aaPredicted RBP12.63□□□□□ -0.39
RFC4-208ENST00000447345 UXTQ9UBK9 157 aaPredicted RBP12.63□□□□□ -0.39
RFC4-208ENST00000447345 NCANO14594 1321 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 KMT2EQ8IZD2 1858 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 PI4K2BG5E9Z4 385 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 MICAL2O94851 1124 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 LETM1O95202 739 aaPredicted RBP12.62□□□□□ -0.39
RFC4-208ENST00000447345 PRAMEF12O95522 483 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 ABL1P00519 1130 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 F11P03951 625 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 CFHP08603 1231 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 PON1P27169 355 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 VIPR2P41587 438 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 ZXDAP98168 799 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 GCNT1Q02742 428 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 NCAPHQ15003 741 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 ZSCAN23Q3MJ62 389 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 SGO2Q562F6 1265 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 TXNDC8Q6A555 127 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 TANGO2Q6ICL3 276 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 GPRIN1Q7Z2K8 1008 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 NUP93Q8N1F7 819 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 SLC44A3Q8N4M1 653 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 MAB21L3Q8N8X9 362 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 TTC16Q8NEE8 873 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 SCAMP5Q8TAC9 235 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 SMARCD2Q92925 531 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 MYRFLQ96LU7 910 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 FUCA2Q9BTY2 467 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 LSM14BQ9BX40 385 aaKnown RBP12.62□□□□□ -0.39
RFC4-208ENST00000447345 PLA2G2FQ9BZM2 168 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 APEX2Q9UBZ4 518 aa12.62□□□□□ -0.39
RFC4-208ENST00000447345 AJAP1Q9UKB5 411 aaPredicted RBP12.62□□□□□ -0.39
RFC4-208ENST00000447345 GTPBP10A4D1E9 387 aaKnown RBP12.61□□□□□ -0.39
RFC4-208ENST00000447345 RNF225M0QZC1 329 aaPredicted RBP12.61□□□□□ -0.39
RFC4-208ENST00000447345 TPM2P07951 284 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 ATP1A3P13637 1013 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 NPR3P17342 541 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 CDK11BP21127 795 aaKnown RBP12.61□□□□□ -0.39
RFC4-208ENST00000447345 BRD2P25440 801 aaKnown RBP12.61□□□□□ -0.39
RFC4-208ENST00000447345 USP8P40818 1118 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 ZNF165P49910 485 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 COPB1P53618 953 aaKnown RBP12.61□□□□□ -0.39
RFC4-208ENST00000447345 TAF10Q12962 218 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 NFKBIBQ15653 356 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 SKOR2Q2VWA4 1001 aaPredicted RBP12.61□□□□□ -0.39
RFC4-208ENST00000447345 ARID3BQ8IVW6 561 aaPredicted RBP12.61□□□□□ -0.39
RFC4-208ENST00000447345 DHX40Q8IX18 779 aaKnown RBP12.61□□□□□ -0.39
RFC4-208ENST00000447345 ANKRD20A12PQ8NF67 263 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 EDAQ92838 391 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 FBXO32Q969P5 355 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 RSPRY1Q96DX4 576 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 TTLL2Q9BWV7 592 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 SLC46A2Q9BY10 475 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 FAM124BQ9H5Z6 455 aaPredicted RBP12.61□□□□□ -0.39
RFC4-208ENST00000447345 TASP1Q9H6P5 420 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 ZFP14Q9HCL3 533 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 SIX2Q9NPC8 291 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 EHD2Q9NZN4 543 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 TSPAN16Q9UKR8 245 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 DUSP12Q9UNI6 340 aa12.61□□□□□ -0.39
RFC4-208ENST00000447345 C2orf78A6NCI8 922 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 RTN3O95197 1032 aaPredicted RBP12.6□□□□□ -0.39
RFC4-208ENST00000447345 CKMP06732 381 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 PNMA6AP0CW24 399 aaPredicted RBP12.6□□□□□ -0.39
RFC4-208ENST00000447345 VDRP11473 427 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 YWHAQP27348 245 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 AVPR1AP37288 418 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 KLK7P49862 253 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 MFAP3P55082 362 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 KCNMA1Q12791 1236 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 ARHGAP17Q68EM7 881 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 VITQ6UXI7 678 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms