RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ECM1Q16610 540 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 C2orf27AQ580R0 203 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 ARHGAP40Q5TG30 622 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 VPS53Q5VIR6 699 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 TMPRSS12Q86WS5 348 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 SHISA5Q8N114 240 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 FRMD1Q8N878 549 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 SMARCC2Q8TAQ2 1214 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 TMEM176AQ96HP8 235 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 PIGSQ96S52 555 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 SDF4Q9BRK5 362 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 GPR88Q9GZN0 384 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 KAT14Q9H8E8 782 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 CPNE5Q9HCH3 593 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 STARD5Q9NSY2 213 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 OBP2AQ9NY56 170 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 MTRRQ9UBK8 725 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 MAD2L2Q9UI95 211 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 CELSR2Q9HCU4 2923 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 PNMA6FA0A0J9YX94 578 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 A0A1B0GTL3 188 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 BLACEA4D250 179 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 OTOL1A6NHN0 477 aaPredicted RBP3.64□□□□□ -1.83
PMS1-215ENST00000447232 WNT11O96014 354 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 ZNF883P0CG24 379 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 GJA1P17302 382 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 HOXA11P31270 313 aaPredicted RBP3.64□□□□□ -1.83
PMS1-215ENST00000447232 MLH1P40692 756 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 CDC42EP1Q00587 391 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 GSTM4Q03013 218 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 CCDC173Q0VFZ6 552 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 MYO1EQ12965 1108 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 DRP2Q13474 957 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 TEAD2Q15562 447 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 FAM171A1Q5VUB5 890 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 ANO7Q6IWH7 933 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 CDPF1Q6NVV7 123 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 HAUS6Q7Z4H7 955 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 HOMER1Q86YM7 354 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 TICAM1Q8IUC6 712 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 CCNJLQ8IV13 435 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 LEMD2Q8NC56 503 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 RLN3Q8WXF3 142 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 SCLT1Q96NL6 688 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 CDC6Q99741 560 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 A0A087WZ62 844 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 A0A1W2PQD8 194 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 RAB11FIP3O75154 756 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 TADA2AO75478 443 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 ABLIM3O94929 683 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 FGAP02671 866 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 LRG1P02750 347 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 F13BP05160 661 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 GRIA4P48058 902 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 HSP90AA2PQ14568 343 aaPredicted RBP3.63□□□□□ -1.83
PMS1-215ENST00000447232 PTPAQ15257 358 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 CYP4A22Q5TCH4 519 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 SWSAP1Q6NVH7 229 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 ZNF410Q86VK4 478 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 ARID3BQ8IVW6 561 aaPredicted RBP3.63□□□□□ -1.83
PMS1-215ENST00000447232 TCEAL8Q8IYN2 117 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 ENAHQ8N8S7 591 aaPredicted RBP3.63□□□□□ -1.83
PMS1-215ENST00000447232 C2CD4AQ8NCU7 369 aaPredicted RBP3.63□□□□□ -1.83
PMS1-215ENST00000447232 CNNM3Q8NE01 707 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 ZNF461Q8TAF7 563 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 FBLIM1Q8WUP2 373 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 RABGGTAQ92696 567 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 TCF12Q99081 682 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 MXRA8Q9BRK3 442 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 PAAF1Q9BRP4 392 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 FDXACB1Q9BRP7 624 aaPredicted RBP3.63□□□□□ -1.83
PMS1-215ENST00000447232 LRRC3Q9BY71 257 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 INO80BQ9C086 356 aaPredicted RBP3.63□□□□□ -1.83
PMS1-215ENST00000447232 GOLGA2P5Q9HBQ8 144 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 AGO4Q9HCK5 861 aaKnown RBP3.63□□□□□ -1.83
PMS1-215ENST00000447232 HPS4Q9NQG7 708 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 ECHDC1Q9NTX5 307 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 TBX20Q9UMR3 447 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 BACE2Q9Y5Z0 518 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 CDY1Q9Y6F8 540 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 ABCA2Q9BZC7 2435 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 NBASA2RRP1 2371 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 NEDD4P46934 1319 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 MYLKQ15746 1914 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 A0A096LPE4 126 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 FAM95CA0A1B0GW59 222 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 A0A1W2PP55 124 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 A0A1W2PPZ6 126 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 ITGA4P13612 1032 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 HNRNPLP14866 589 aaKnown RBP eCLIP3.63□□□□□ -1.833e-6■■■□□ 15.5
PMS1-215ENST00000447232 NT5C2P49902 561 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 GALK1P51570 392 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 NFKB2Q00653 900 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 SOX4Q06945 474 aaPredicted RBP3.63□□□□□ -1.83
PMS1-215ENST00000447232 SCRN1Q12765 414 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 SPRED3Q2MJR0 410 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 TBC1D25Q3MII6 688 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 CCDC178Q5BJE1 867 aa3.63□□□□□ -1.83
PMS1-215ENST00000447232 LMBRD2Q68DH5 695 aaPredicted RBP3.63□□□□□ -1.83
PMS1-215ENST00000447232 NAIF1Q69YI7 327 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms