RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 CHD7Q9P2D1 2997 aa8.63□□□□□ -1.03
SMARCE1-206ENST00000447024 TRBV23OR9-2A0A075B6M9 112 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 ENPP3O14638 875 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 ASAP2O43150 1006 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 GPR32O75388 356 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 MAFO75444 373 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 RPS6KA5O75582 802 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 PPM1BO75688 479 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 STBD1O95210 358 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 FUCA1P04066 466 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 FANCCQ00597 558 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 POU5F1BQ06416 359 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 GRB10Q13322 594 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 PCBP1Q15365 356 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 TCTN1Q2MV58 587 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 EARS2Q5JPH6 523 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 MAFAQ8NHW3 353 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 YME1L1Q96TA2 773 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 HSD17B14Q9BPX1 270 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 BACH2Q9BYV9 841 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 RAB34Q9BZG1 259 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 TTC12Q9H892 705 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 TUFT1Q9NNX1 390 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 CYP26B1Q9NR63 512 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 ANKEF1Q9NU02 776 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 AKT3Q9Y243 479 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 INVSQ9Y283 1065 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 PRRC2BQ5JSZ5 2229 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 TRANK1O15050 2925 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 CDH23Q9H251 3354 aa8.62□□□□□ -1.03
SMARCE1-206ENST00000447024 PTPRSQ13332 1948 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 LOXHD1Q8IVV2 1947 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 LINC01553A4QN01 128 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 NPHS1O60500 1241 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 RB1P06400 928 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 DARSP14868 501 aaKnown RBP8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 PDCP20941 246 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 CD52P31358 61 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 PDIA5Q14554 519 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 UGCGQ16739 394 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 TMEM266Q2M3C6 531 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 NAALADL2Q58DX5 795 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 RILPL1Q5EBL4 403 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 FAM26FQ5R3K3 315 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.61□□□□□ -1.032e-7■■□□□ 13.5
SMARCE1-206ENST00000447024 ETV3LQ6ZN32 361 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 SLC24A5Q71RS6 500 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 ANO5Q75V66 913 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 LGI4Q8N135 537 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 ARHGEF39Q8N4T4 335 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 SLC16A11Q8NCK7 471 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 ERMNQ8TAM6 284 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 TCP11Q8WWU5 503 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 CEP170P1Q96L14 293 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 CEP89Q96ST8 783 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 EIF2AK1Q9BQI3 630 aaKnown RBP8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 LXNQ9BS40 222 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 SSBP3Q9BWW4 388 aaPredicted RBP8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 GCOM2Q9BZD3 368 aaPredicted RBP8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 PRDM12Q9H4Q4 367 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 DHX33Q9H6R0 707 aaKnown RBP8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 ELAC1Q9H777 363 aaKnown RBP8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 AGO3Q9H9G7 860 aaKnown RBP8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 ERVK-5Q9HDB9 667 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 CHST12Q9NRB3 414 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 RGS18Q9NS28 235 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 SIP14410 1827 aa8.61□□□□□ -1.03
SMARCE1-206ENST00000447024 BRWD1Q9NSI6 2320 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 A0A0C4DFX4 3053 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 TTC28Q96AY4 2481 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 DENND3A2RUS2 1198 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 C5orf67F2Z3F1 127 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 DGKIO75912 1065 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 SLITRK3O94933 977 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 BMP15O95972 392 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 VTNP04004 478 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 OR52Z1P0C646 297 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 MYOGP15173 224 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 ZSCAN20P17040 1043 aaPredicted RBP8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 SFPQP23246 707 aaKnown RBP eCLIP8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 YWHABP31946 246 aaKnown RBP8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 MCM7P33993 719 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 PRPHP41219 470 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 GPC3P51654 580 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 CLCN3P51790 818 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 NLRP11P59045 1033 aaKnown RBP8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 FAM189BP81408 668 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 SLC7A5Q01650 507 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 CUL4AQ13619 759 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 MXD4Q14582 209 aaPredicted RBP8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 KIZQ2M2Z5 673 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 MTERF2Q49AM1 385 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 TTC38Q5R3I4 469 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 HAUS3Q68CZ6 603 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 NCAPH2Q6IBW4 605 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 DCP2Q8IU60 420 aaKnown RBP8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 CMTR2Q8IYT2 770 aaKnown RBP8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 KYQ8NBH2 561 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 SLC17A8Q8NDX2 589 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms