RNA–Protein interactions for RNA: ENST00000446273.1

TNRC6B-205, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TNRC6B, Length 4,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-205ENST00000446273 NEMP1O14524 444 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 TGFB1I1O43294 461 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 XYLBO75191 536 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 PPFIA2O75334 1257 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 HSPA4LO95757 839 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 ABHD2P08910 425 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 NOVP48745 357 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 ATN1P54259 1190 aaPredicted RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 VCPP55072 806 aaKnown RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 MYL6P60660 151 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 EPC2Q52LR7 807 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 SLC27A1Q6PCB7 646 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 PHF13Q86YI8 300 aaPredicted RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 IFT43Q96FT9 208 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 TSSK1BQ9BXA7 367 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 TRIM15Q9C019 465 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 OSGEPQ9NPF4 335 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 BATF3Q9NR55 127 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 ZNF446Q9NWS9 450 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 ZC3H7BQ9UGR2 993 aaKnown RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 XPO7Q9UIA9 1087 aaKnown RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 ANKRD36CQ5JPF3 1778 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 SPATA31C2B4DYI2 1134 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 SMIM22K7EJ46 135 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 CASQ2O14958 399 aaPredicted RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 TM9SF1O15321 606 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 RRM1P23921 792 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 NAB1Q13506 487 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 SETD3Q86TU7 594 aaPredicted RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 DDX42Q86XP3 938 aaKnown RBP eCLIP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 APLFQ8IW19 511 aaPredicted RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 ATP6V0D2Q8N8Y2 350 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 SPATA18Q8TC71 538 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 C7orf43Q8WVR3 580 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 RIN2Q8WYP3 895 aaPredicted RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 OXCT2Q9BYC2 517 aaPredicted RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 ECT2Q9H8V3 914 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 DNAJC17Q9NVM6 304 aaKnown RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 DPP3Q9NY33 737 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 EFR3BQ9Y2G0 817 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 ANGPTL3Q9Y5C1 460 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 BTBD19C9JJ37 291 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 HGSO14964 777 aaPredicted RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 NCAM2O15394 837 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 H2AFYO75367 372 aaKnown RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 SASH3O75995 380 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 MTA2O94776 668 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 PMLP29590 882 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 HARS2P49590 506 aaKnown RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 BCAT1P54687 386 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 EPHB3P54753 998 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 PTPN11Q06124 597 aaPredicted RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 PKN2Q16513 984 aaKnown RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 KYNUQ16719 465 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 HGSNATQ68CP4 663 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 NXNQ6DKJ4 435 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 SLC30A10Q6XR72 485 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 GPR142Q7Z601 462 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 LINC00523Q86TU6 105 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 FBXO25Q8TCJ0 367 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 SLC20A1Q8WUM9 679 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 LRRC39Q96DD0 335 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 PRMT1Q99873 361 aaKnown RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 CISHQ9NSE2 258 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 KCNN4O15554 427 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 UPP2O95045 317 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 CHEK2O96017 543 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 GNL1P36915 607 aaPredicted RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 SLC11A2P49281 568 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 TPD52P55327 224 aaPredicted RBP8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 PTP4A2Q12974 167 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 LLGL1Q15334 1064 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 POLNQ7Z5Q5 900 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 SLC47A2Q86VL8 602 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 SH2D3AQ9BRG2 576 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 GRID1Q9ULK0 1009 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 MYH6P13533 1939 aa8.59□□□□□ -1.03
TNRC6B-205ENST00000446273 GLI3P10071 1580 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 COL1A1P02452 1464 aaPredicted RBP8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 DNALI1O14645 258 aaPredicted RBP8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 PPP1R11O60927 126 aaPredicted RBP8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 KLHL2O95198 593 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 SLURP2P0DP57 97 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 INSRRP14616 1297 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 CCND1P24385 295 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 GRK4P32298 578 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 SPRP35270 261 aaPredicted RBP8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 CNTN2Q02246 1040 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 LAMTOR4Q0VGL1 99 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 ZNF235Q14590 738 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 MMEL1Q495T6 779 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 CBWD6Q4V339 395 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 CBWD3Q5JTY5 395 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 CBWD5Q5RIA9 395 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 ARHGEF19Q8IW93 802 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 CALML6Q8TD86 181 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 ZNF606Q8WXB4 792 aa8.58□□□□□ -1.04
TNRC6B-205ENST00000446273 ARL8AQ96BM9 186 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms