RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 CCDC65Q8IXS2 484 aa15.15■□□□□ 0.02
SMARCAL1-210ENST00000445153 RDH13Q8NBN7 331 aa15.15■□□□□ 0.02
SMARCAL1-210ENST00000445153 LINC00301Q8NCQ3 95 aa15.15■□□□□ 0.02
SMARCAL1-210ENST00000445153 ZNF516Q92618 1163 aa15.15■□□□□ 0.02
SMARCAL1-210ENST00000445153 GZF1Q9H116 711 aaPredicted RBP15.15■□□□□ 0.02
SMARCAL1-210ENST00000445153 KBTBD4Q9NVX7 518 aa15.15■□□□□ 0.02
SMARCAL1-210ENST00000445153 HSPBP1Q9NZL4 362 aa15.15■□□□□ 0.02
SMARCAL1-210ENST00000445153 EBF1Q9UH73 591 aa15.15■□□□□ 0.02
SMARCAL1-210ENST00000445153 CNOT1A5YKK6 2376 aaKnown RBP15.15■□□□□ 0.02
SMARCAL1-210ENST00000445153 MAP1BP46821 2468 aaKnown RBP15.15■□□□□ 0.02
SMARCAL1-210ENST00000445153 CHD8Q9HCK8 2581 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 ZNF840PA6NDX5 716 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 LEFTY2O00292 366 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 TNNC2P02585 160 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 CHRM1P11229 460 aaPredicted RBP15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 HNRNPLP14866 589 aaKnown RBP eCLIP15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 SLC6A11P48066 632 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 SEC13P55735 322 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 CYP27A1Q02318 531 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 KCNB1Q14721 858 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 FOXD4L5Q5VV16 416 aaPredicted RBP15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 C4orf50Q6ZRC1 276 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 DENND5BQ6ZUT9 1274 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 EPM2AIP1Q7L775 607 aaPredicted RBP15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 ADGRG2Q8IZP9 1017 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 FSIP1Q8NA03 581 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 MYCBPAPQ8TBZ2 947 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 ZNF507Q8TCN5 953 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 USP33Q8TEY7 942 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 FOXD4L4Q8WXT5 416 aaPredicted RBP15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 MMS19Q96T76 1030 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 TPSD1Q9BZJ3 242 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 TRIM9Q9C026 710 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 DPEP3Q9H4B8 488 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 PCDHGA5Q9Y5G8 931 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 KIAA1549LQ6ZVL6 1849 aa15.14■□□□□ 0.01
SMARCAL1-210ENST00000445153 F8VP50 259 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 KIAA0391O15091 583 aaKnown RBP15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 CLIC2O15247 247 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 APBB3O95704 486 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 OLFM2O95897 454 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 CASP1P29466 404 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 PMLP29590 882 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 DGKEP52429 567 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 ST3GAL2Q16842 350 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 C2orf27AQ580R0 203 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 MDH1BQ5I0G3 518 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 SHC4Q6S5L8 630 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 FILIP1Q7Z7B0 1213 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 WDR49Q8IV35 697 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 CCDC33Q8N5R6 958 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 DDX1Q92499 740 aaKnown RBP15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 TTLL2Q9BWV7 592 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 VPS45Q9NRW7 570 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 TRPM5Q9NZQ8 1165 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 ABCA7Q8IZY2 2146 aa15.13■□□□□ 0.01
SMARCAL1-210ENST00000445153 PTPRDP23468 1912 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 BCLAF3A2AJT9 711 aaKnown RBP15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 CLDN5O00501 218 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 KCNK5O95279 499 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 CYP17A1P05093 508 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 DLATP10515 647 aaKnown RBP15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 BCKDHBP21953 392 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 GNL1P36915 607 aaPredicted RBP15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 SLC7A9P82251 487 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 CREB5Q02930 508 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 NR1H3Q13133 447 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 SURF1Q15526 300 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 SNRNP35Q16560 246 aaKnown RBP15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 EMC10Q5UCC4 262 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 TMEM92Q6UXU6 159 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 HS2ST1Q7LGA3 356 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 SNX21Q969T3 373 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 ACDQ96AP0 544 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 ELMO3Q96BJ8 720 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 CHAMP1Q96JM3 812 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 C8orf48Q96LL4 319 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 LSM14BQ9BX40 385 aaKnown RBP15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 ZNF518BQ9C0D4 1074 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 TNMDQ9H2S6 317 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 ZSCAN16Q9H4T2 348 aaPredicted RBP15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 AGPAT3Q9NRZ7 376 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 SMPD4Q9NXE4 827 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 CPQQ9Y646 472 aa15.12■□□□□ 0.01
SMARCAL1-210ENST00000445153 TACC1O75410 805 aa15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 NFATC1O95644 943 aa15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 CAVIN2O95810 425 aa15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 OAS1P00973 400 aaKnown RBP15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 PTPN1P18031 435 aaKnown RBP15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 NOP14P78316 857 aaKnown RBP15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 EHHADHQ08426 723 aa15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 TAF10Q12962 218 aa15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 PSMD6Q15008 389 aa15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 STK38Q15208 465 aa15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 DHCR24Q15392 516 aa15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 MAPRE1Q15691 268 aaKnown RBP15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 WDR72Q3MJ13 1102 aa15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 FOXD4L6Q3SYB3 417 aaPredicted RBP15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 RNF43Q68DV7 783 aa15.11■□□□□ 0.01
SMARCAL1-210ENST00000445153 ANO7Q6IWH7 933 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms