RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 GNL1P36915 607 aaPredicted RBP14.93□□□□□ -0.02
TREX1-202ENST00000444177 AVPR1AP37288 418 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 PMS1P54277 932 aaKnown RBP14.93□□□□□ -0.02
TREX1-202ENST00000444177 LRRC63Q05C16 580 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 TNK2Q07912 1038 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 PPP3CAQ08209 521 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 MAPRE1Q15691 268 aaKnown RBP14.93□□□□□ -0.02
TREX1-202ENST00000444177 CFAP221Q4G0U5 840 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 DCAF17Q5H9S7 520 aaPredicted RBP14.93□□□□□ -0.02
TREX1-202ENST00000444177 MDH1BQ5I0G3 518 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 TXNDC8Q6A555 127 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 SPOPLQ6IQ16 392 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 MON1AQ86VX9 555 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 SCN4BQ8IWT1 228 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 DCLK2Q8N568 766 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 MRPS31Q92665 395 aaKnown RBP14.93□□□□□ -0.02
TREX1-202ENST00000444177 USP13Q92995 863 aaPredicted RBP14.93□□□□□ -0.02
TREX1-202ENST00000444177 FUBP3Q96I24 572 aaKnown RBP eCLIP14.93□□□□□ -0.02
TREX1-202ENST00000444177 MYRFLQ96LU7 910 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 FAM126AQ9BYI3 521 aaPredicted RBP14.93□□□□□ -0.02
TREX1-202ENST00000444177 IMPG2Q9BZV3 1241 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 DPEP3Q9H4B8 488 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 GKN1Q9NS71 199 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 RBM12Q9NTZ6 932 aaKnown RBP14.93□□□□□ -0.02
TREX1-202ENST00000444177 MAGEC2Q9UBF1 373 aaPredicted RBP14.93□□□□□ -0.02
TREX1-202ENST00000444177 CCL26Q9Y258 94 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 NME7Q9Y5B8 376 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 PATJQ8NI35 1801 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 NOL4O94818 638 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 TDGF1P13385 188 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 PPP1R2P41236 205 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 CXCL12P48061 93 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 CCR3P51677 355 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 NRLP54845 237 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 CDH8P55286 799 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 FKBP3Q00688 224 aaKnown RBP14.92□□□□□ -0.02
TREX1-202ENST00000444177 ENPEPQ07075 957 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 LRRC32Q14392 662 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 GAS6Q14393 721 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 SGSM1Q2NKQ1 1148 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 ITPRIPL2Q3MIP1 535 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 WDR44Q5JSH3 913 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 ANKRD40Q6AI12 368 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 KLHL10Q6JEL2 608 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 KIAA2013Q8IYS2 634 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 SPEM1Q8N4L4 309 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 TAS1R2Q8TE23 839 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 TRMT2BQ96GJ1 504 aaKnown RBP14.92□□□□□ -0.02
TREX1-202ENST00000444177 PCED1BQ96HM7 432 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 HINFPQ9BQA5 517 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 FAM83CQ9BQN1 747 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 SDCBP2Q9H190 292 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 TMEM8AQ9HCN3 771 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 TDP1Q9NUW8 608 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 CTNND2Q9UQB3 1225 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 CACNA1AO00555 2505 aa14.92□□□□□ -0.02
TREX1-202ENST00000444177 SLC16A3O15427 465 aaKnown RBP14.91□□□□□ -0.02
TREX1-202ENST00000444177 ASS1P00966 412 aaKnown RBP14.91□□□□□ -0.02
TREX1-202ENST00000444177 FAM163BP0C2L3 166 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 CD44P16070 742 aaKnown RBP14.91□□□□□ -0.02
TREX1-202ENST00000444177 BDNFP23560 247 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 MAGEA11P43364 429 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 ID4P47928 161 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 MXI1P50539 228 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 NOP14P78316 857 aaKnown RBP14.91□□□□□ -0.02
TREX1-202ENST00000444177 MORC3Q14149 939 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 PPP2R5DQ14738 602 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 PON2Q15165 354 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 DGKKQ5KSL6 1271 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 TCERG1LQ5VWI1 586 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 B3GALNT2Q8NCR0 500 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 CCDC150Q8NCX0 1101 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 MYCBPAPQ8TBZ2 947 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 TAF4BQ92750 862 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 LMBRD1Q9NUN5 540 aa14.91□□□□□ -0.02
TREX1-202ENST00000444177 UXTQ9UBK9 157 aaPredicted RBP14.91□□□□□ -0.02
TREX1-202ENST00000444177 STX10O60499 249 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 TADA3O75528 432 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 PTPN1P18031 435 aaKnown RBP14.9□□□□□ -0.02
TREX1-202ENST00000444177 ANXA13P27216 316 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 GTF2H1P32780 548 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 GRIK1P39086 918 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 ASPAP45381 313 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 SATB1Q01826 763 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 RUNX3Q13761 415 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 ZNF268Q14587 947 aaPredicted RBP14.9□□□□□ -0.02
TREX1-202ENST00000444177 CAMK4Q16566 473 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 KRT39Q6A163 491 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 VSTM1Q6UX27 236 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 ZC3H3Q8IXZ2 948 aaKnown RBP14.9□□□□□ -0.02
TREX1-202ENST00000444177 NELFBQ8WX92 580 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 DHTKD1Q96HY7 919 aaPredicted RBP14.9□□□□□ -0.02
TREX1-202ENST00000444177 CYP2S1Q96SQ9 504 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 EPC1Q9H2F5 836 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 KIF9Q9HAQ2 790 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 HPS4Q9NQG7 708 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 NUP210Q8TEM1 1887 aaPredicted RBP14.9□□□□□ -0.02
TREX1-202ENST00000444177 DMXL1Q9Y485 3027 aa14.9□□□□□ -0.02
TREX1-202ENST00000444177 OTOL1A6NHN0 477 aaPredicted RBP14.89□□□□□ -0.03
TREX1-202ENST00000444177 CLDN5O00501 218 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms