RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 LRPAP1P30533 357 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 ZNF81P51508 661 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 PRAMEF17Q5VTA0 474 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 LMBRD2Q68DH5 695 aaPredicted RBP5.64□□□□□ -1.51
VPS50-206ENST00000443443 ZNF280BQ86YH2 543 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 SLC15A3Q8IY34 581 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 SAMD3Q8N6K7 520 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 PAF1Q8N7H5 531 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 VGLL2Q8N8G2 317 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 MRGPRX1Q96LB2 322 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 ACO2Q99798 780 aaKnown RBP5.64□□□□□ -1.51
VPS50-206ENST00000443443 DPCDQ9BVM2 203 aaPredicted RBP5.64□□□□□ -1.51
VPS50-206ENST00000443443 INO80BQ9C086 356 aaPredicted RBP5.64□□□□□ -1.51
VPS50-206ENST00000443443 DUSP22Q9NRW4 184 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 ZSCAN32Q9NX65 697 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 ZIM2Q9NZV7 527 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 SH2B3Q9UQQ2 575 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 THRAP3Q9Y2W1 955 aaKnown RBP5.64□□□□□ -1.51
VPS50-206ENST00000443443 MED16Q9Y2X0 877 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 BTN3A1O00481 513 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 TBC1D4O60343 1298 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 NPSP0C0P6 89 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 CD53P19397 219 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 POU5F1BQ06416 359 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 MYO1EQ12965 1108 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 GTF2H3Q13889 308 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 TBC1D25Q3MII6 688 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 MGAT5BQ3V5L5 792 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 MTX3Q5HYI7 312 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 EPHA10Q5JZY3 1008 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 ZNF783Q6ZMS7 281 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 OSCP1Q8WVF1 389 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 PPM1EQ8WY54 764 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 RAPGEF4Q8WZA2 1011 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 TSR2Q969E8 191 aaKnown RBP5.63□□□□□ -1.51
VPS50-206ENST00000443443 AIFM3Q96NN9 605 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 RTFDC1Q9BY42 306 aaPredicted RBP5.63□□□□□ -1.51
VPS50-206ENST00000443443 FLRT1Q9NZU1 646 aa5.63□□□□□ -1.51
VPS50-206ENST00000443443 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.63□□□□□ -1.51
VPS50-206ENST00000443443 IFRD1O00458 451 aaPredicted RBP5.62□□□□□ -1.51
VPS50-206ENST00000443443 ZNF213O14771 459 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 NPHP1O15259 732 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 CTNND1O60716 968 aaKnown RBP5.62□□□□□ -1.51
VPS50-206ENST00000443443 MYL1P05976 194 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 PRR35P0CG20 571 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 ADORA2AP29274 412 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 PRKAG1P54619 331 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 GPSM2P81274 684 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 HOXA4Q00056 320 aaPredicted RBP5.62□□□□□ -1.51
VPS50-206ENST00000443443 CTBP1Q13363 440 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 PROSER3Q2NL68 480 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 SLC44A4Q53GD3 710 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 ZNF280DQ6N043 979 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 PCGF5Q86SE9 256 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 ABHD11Q8NFV4 315 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 OR6B3Q8NGW1 331 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 ANKS1AQ92625 1134 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 PPP2R3CQ969Q6 453 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 REPS1Q96D71 796 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 ZNF778Q96MU6 729 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 MS4A7Q9GZW8 240 aaPredicted RBP5.62□□□□□ -1.51
VPS50-206ENST00000443443 CXorf36Q9H7Y0 433 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 ADAMTS5Q9UNA0 930 aa5.62□□□□□ -1.51
VPS50-206ENST00000443443 COL3A1P02461 1466 aaPredicted RBP5.62□□□□□ -1.51
VPS50-206ENST00000443443 ZNF500O60304 480 aaPredicted RBP5.61□□□□□ -1.51
VPS50-206ENST00000443443 EXOC3O60645 756 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 PDE8BO95263 885 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 NHLRC4P0CG21 123 aaPredicted RBP5.61□□□□□ -1.51
VPS50-206ENST00000443443 KELP23276 732 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 MAN1A1P33908 653 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 PDE6CP51160 858 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 ATXN1P54253 815 aaKnown RBP5.61□□□□□ -1.51
VPS50-206ENST00000443443 EPHB1P54762 984 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 TPTEP56180 551 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 TUBA4AP68366 448 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 CYP4F2P78329 520 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 HLTFQ14527 1009 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS50-206ENST00000443443 PLA1AQ53H76 456 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 SYCP2LQ5T4T6 812 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 L1TD1Q5T7N2 865 aaKnown RBP5.61□□□□□ -1.51
VPS50-206ENST00000443443 PNLDC1Q8NA58 520 aaKnown RBP5.61□□□□□ -1.51
VPS50-206ENST00000443443 ZBTB34Q8NCN2 500 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 RP9Q8TA86 221 aaKnown RBP5.61□□□□□ -1.51
VPS50-206ENST00000443443 MACROD1Q9BQ69 325 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 SH2D3AQ9BRG2 576 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 MESP1Q9BRJ9 268 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 ZMAT3Q9HA38 289 aaKnown RBP5.61□□□□□ -1.51
VPS50-206ENST00000443443 NRIP3Q9NQ35 241 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 TRMT13Q9NUP7 481 aaKnown RBP5.61□□□□□ -1.51
VPS50-206ENST00000443443 ANAPC4Q9UJX5 808 aa5.61□□□□□ -1.51
VPS50-206ENST00000443443 NOB1Q9ULX3 412 aaKnown RBP5.61□□□□□ -1.51
VPS50-206ENST00000443443 PRRT4C9JH25 899 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 ANP32CO43423 234 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 TSPAN6O43657 245 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 DLDP09622 509 aaKnown RBP5.6□□□□□ -1.51
VPS50-206ENST00000443443 NPR1P16066 1061 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 CERS1P27544 350 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 DGKEP52429 567 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 WNT3P56703 355 aa5.6□□□□□ -1.51
VPS50-206ENST00000443443 SLC13A2Q13183 592 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms