RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 J3KTA2 159 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 DCLK1O15075 740 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 PPP6R2O75170 966 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 SLC6A2P23975 617 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 POLD2P49005 469 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 TOB1P50616 345 aaPredicted RBP4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 DRG2P55039 364 aaKnown RBP4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 GP2P55259 537 aaKnown RBP4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 CLRN1P58418 232 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 TCF15Q12870 199 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 ERV3-1Q14264 604 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 UBXN2BQ14CS0 331 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 INSCQ1MX18 579 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 ZNF750Q32MQ0 723 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 ZIK1Q3SY52 487 aaPredicted RBP4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 CACHD1Q5VU97 1274 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 ATG16L1Q676U5 607 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 NFRKBQ6P4R8 1299 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 RAB11FIP2Q7L804 512 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 LSMEM1Q8N8F7 131 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 SMCR8Q8TEV9 937 aaPredicted RBP4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 RSC1A1Q92681 617 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 LSM14BQ9BX40 385 aaKnown RBP4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 CARD11Q9BXL7 1154 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 SLC25A32Q9H2D1 315 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 ACAD9Q9H845 621 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 CHODLQ9H9P2 273 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 MBD1Q9UIS9 605 aaPredicted RBP4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 KCND3Q9UK17 655 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 CNPY2Q9Y2B0 182 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 TTLL3Q9Y4R7 772 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 FAM90A18PA6NE21 464 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 FAM90A16PA6NEW6 464 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 FAM90A9PA6NNJ1 464 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 FAM90A5PA8MXJ8 464 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 E7EVH7 732 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 SPTLC2O15270 562 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 PJA2O43164 708 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 PIAS2O75928 621 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 STC2O76061 302 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 CHEK2O96017 543 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 VIPP01282 170 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 FAM90A15PP0C7V4 464 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 FAM90A14PP0C7W9 464 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 CYP2C9P11712 490 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 ALAS1P13196 640 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 SLC5A2P31639 672 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 KRT20P35900 424 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 CCT4P50991 539 aaKnown RBP4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 HGFACQ04756 655 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 ZKSCAN8Q15776 578 aaPredicted RBP4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 TRIM60Q495X7 471 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 FAM133BQ5BKY9 247 aaKnown RBP4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 Q6ZUG5 572 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 USP30Q70CQ3 517 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 ENOSF1Q7L5Y1 443 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 SYT13Q7L8C5 426 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 XYLT1Q86Y38 959 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 ADAMTS15Q8TE58 950 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 PWWP2AQ96N64 755 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 SLC46A1Q96NT5 459 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 REEP2Q9BRK0 252 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 BRD8Q9H0E9 1235 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 SIK2Q9H0K1 926 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 LMAN2LQ9H0V9 348 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 ABHD16BQ9H3Z7 469 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 L2HGDHQ9H9P8 463 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 ZSCAN32Q9NX65 697 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 DNAJC16Q9Y2G8 782 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 RRP7AQ9Y3A4 280 aaKnown RBP4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 CDY1Q9Y6F8 540 aa4.57□□□□□ -1.68
CDC42BPA-207ENST00000441725 MYOCOSA0A1B0GUC4 107 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 A0A1W2PRQ8 180 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 PI4KAP2A4QPH2 592 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 OR2W5A6NFC9 320 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 AQP7P3A6NL99 342 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 PLOD3O60568 738 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 RASAL1O95294 804 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 WNT11O96014 354 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 POMCP01189 267 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 XRCC6P12956 609 aaKnown RBP eCLIP4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 ABCD3P28288 659 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 SSR1P43307 286 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 EPHB3P54753 998 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 NAP1L1P55209 391 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 GPS1Q13098 491 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 MRPL49Q13405 166 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 CDC37Q16543 378 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 FAM214AQ32MH5 1076 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 SPECC1Q5M775 1068 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 ABLIM2Q6H8Q1 611 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 ADGRE4PQ86SQ3 457 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 TBC1D15Q8TC07 691 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 MZB1Q8WU39 189 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 SPATA25Q9BR10 227 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 TLR10Q9BXR5 811 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 FAM83DQ9H4H8 585 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 KRT84Q9NSB2 600 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 PI4KBQ9UBF8 816 aa4.56□□□□□ -1.68
CDC42BPA-207ENST00000441725 C19orf53Q9UNZ5 99 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms