RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 HLTFQ14527 1009 aaKnown RBP eCLIP15.69■□□□□ 0.1
IFT140-204ENST00000439987 ACAP1Q15027 740 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 FAM153CQ494X1 144 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 ZFYVE27Q5T4F4 411 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 OLFML1Q6UWY5 402 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 C3orf58Q8NDZ4 430 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 SLC2A14Q8TDB8 520 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 PIWIL1Q96J94 861 aaKnown RBP15.69■□□□□ 0.1
IFT140-204ENST00000439987 SLITRK1Q96PX8 696 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 HEMGNQ9BXL5 484 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.69■□□□□ 0.1
IFT140-204ENST00000439987 UBN1Q9NPG3 1134 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 FAM114A2Q9NRY5 505 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 DDX56Q9NY93 547 aaKnown RBP15.69■□□□□ 0.1
IFT140-204ENST00000439987 FAM153AQ9UHL3 310 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 RASAL2Q9UJF2 1139 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 CASTOR2A6NHX0 329 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 KBTBD13C9JR72 458 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 CPP00450 1065 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 ZNF143P52747 638 aaPredicted RBP15.69■□□□□ 0.1
IFT140-204ENST00000439987 SLC25A11Q02978 314 aaKnown RBP15.69■□□□□ 0.1
IFT140-204ENST00000439987 MBTPS1Q14703 1052 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 UPP1Q16831 310 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 ANKS1BQ7Z6G8 1248 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 CCDC105Q8IYK2 499 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 SH3TC2Q8TF17 1288 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 C1orf54Q8WWF1 131 aa15.69■□□□□ 0.1
IFT140-204ENST00000439987 PI4K2BG5E9Z4 385 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 GABBR2O75899 941 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 POMCP01189 267 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 DUPD1Q68J44 220 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 ZNF598Q86UK7 904 aaKnown RBP15.68■□□□□ 0.1
IFT140-204ENST00000439987 ECHDC2Q86YB7 292 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 TMEM86AQ8N2M4 240 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 PAAF1Q9BRP4 392 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 DPH5Q9H2P9 285 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 ASNSD1Q9NWL6 643 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 C2CD4BA6NLJ0 364 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 PAPSS1O43252 624 aaPredicted RBP15.68■□□□□ 0.1
IFT140-204ENST00000439987 RNF8O76064 485 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 KRT7P08729 469 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 YY1P25490 414 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 COPS2P61201 443 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 HADHQ16836 314 aaKnown RBP15.68■□□□□ 0.1
IFT140-204ENST00000439987 ODF2Q5BJF6 829 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 MFSD7Q6UXD7 560 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 ZDHHC17Q8IUH5 632 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 SCUBE3Q8IX30 993 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 TRIM31Q9BZY9 425 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 CHST7Q9NS84 486 aa15.68■□□□□ 0.1
IFT140-204ENST00000439987 ATP2C2O75185 946 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 PTPN1P18031 435 aaKnown RBP15.67■□□□□ 0.1
IFT140-204ENST00000439987 GPD1P21695 349 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 ACAT1P24752 427 aaKnown RBP15.67■□□□□ 0.1
IFT140-204ENST00000439987 IL1R2P27930 398 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 TKTP29401 623 aaKnown RBP15.67■□□□□ 0.1
IFT140-204ENST00000439987 FLT3P36888 993 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 KCNJ1P48048 391 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 RPL34P49207 117 aaKnown RBP15.67■□□□□ 0.1
IFT140-204ENST00000439987 AARSP49588 968 aaKnown RBP eCLIP15.67■□□□□ 0.1
IFT140-204ENST00000439987 SLC6A3Q01959 620 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 GRIK3Q13003 919 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 TRNP1Q6NT89 227 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 LRRC31Q6UY01 552 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 DSTYKQ6XUX3 929 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 PACS2Q86VP3 889 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 SUGP1Q8IWZ8 645 aaKnown RBP15.67■□□□□ 0.1
IFT140-204ENST00000439987 RXFP2Q8WXD0 754 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 ATG4AQ8WYN0 398 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 RAPGEF5Q92565 580 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 SLCO2A1Q92959 643 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 HNRNPABQ99729 332 aaKnown RBP15.67■□□□□ 0.1
IFT140-204ENST00000439987 CNPY3Q9BT09 278 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 DCLK3Q9C098 648 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 CYLDQ9NQC7 956 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 RGS18Q9NS28 235 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 HOMER3Q9NSC5 361 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 LRRD1A4D1F6 860 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 GRAP2O75791 330 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 PDGFRAP16234 1089 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 LHX1P48742 406 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 DRG2P55039 364 aaKnown RBP15.67■□□□□ 0.1
IFT140-204ENST00000439987 SPOCD1Q6ZMY3 1216 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 ACSF2Q96CM8 615 aaPredicted RBP15.67■□□□□ 0.1
IFT140-204ENST00000439987 NEUROG2Q9H2A3 272 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 ZWILCHQ9H900 591 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 DDX43Q9NXZ2 648 aaKnown RBP15.67■□□□□ 0.1
IFT140-204ENST00000439987 INPP5FQ9Y2H2 1132 aa15.67■□□□□ 0.1
IFT140-204ENST00000439987 R3HDM2Q9Y2K5 976 aaKnown RBP15.67■□□□□ 0.1
IFT140-204ENST00000439987 TDRD15B5MCY1 1934 aaKnown RBP15.66■□□□□ 0.1
IFT140-204ENST00000439987 CAPN15O75808 1086 aa15.66■□□□□ 0.1
IFT140-204ENST00000439987 ECEL1O95672 775 aa15.66■□□□□ 0.1
IFT140-204ENST00000439987 MIPP30301 263 aa15.66■□□□□ 0.1
IFT140-204ENST00000439987 PTPN7P35236 360 aa15.66■□□□□ 0.1
IFT140-204ENST00000439987 PCK1P35558 622 aa15.66■□□□□ 0.1
IFT140-204ENST00000439987 SNX1Q13596 522 aa15.66■□□□□ 0.1
IFT140-204ENST00000439987 DNAJC21Q5F1R6 531 aaKnown RBP15.66■□□□□ 0.1
IFT140-204ENST00000439987 TFDP3Q5H9I0 405 aa15.66■□□□□ 0.1
IFT140-204ENST00000439987 RTN4RL1Q86UN2 441 aaPredicted RBP15.66■□□□□ 0.1
IFT140-204ENST00000439987 FUKQ8N0W3 1084 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms