RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 TCF4P15884 667 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 CHI3L1P36222 383 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-209ENST00000437951 USP11P51784 963 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 HK2P52789 917 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 IL5RAQ01344 420 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 ALDH6A1Q02252 535 aaKnown RBP11.94□□□□□ -0.5
PTCH1-209ENST00000437951 FAM98CQ17RN3 349 aaKnown RBP11.94□□□□□ -0.5
PTCH1-209ENST00000437951 ZSWIM7Q19AV6 140 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 NYAP1Q6ZVC0 841 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 ARPINQ7Z6K5 226 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 EPHX4Q8IUS5 362 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 OR7A2PQ8NGA2 310 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 SKA1Q96BD8 255 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 SRPK1Q96SB4 655 aaKnown RBP11.94□□□□□ -0.5
PTCH1-209ENST00000437951 PIDD1Q9HB75 910 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 CYLDQ9NQC7 956 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 PCSK1NQ9UHG2 260 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 GSAPA4D1B5 854 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 DYNC1LI2O43237 492 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-209ENST00000437951 LRPAP1P30533 357 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 RCVRNP35243 200 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 TTLL9Q3SXZ7 439 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 ZCCHC8Q6NZY4 707 aaKnown RBP11.94□□□□□ -0.5
PTCH1-209ENST00000437951 RASGRP4Q8TDF6 673 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 CNKSR1Q969H4 720 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 KCNF1Q9H3M0 494 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 CNOT7Q9UIV1 285 aaKnown RBP11.94□□□□□ -0.5
PTCH1-209ENST00000437951 MLH3Q9UHC1 1453 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 PABPC1P11940 636 aaKnown RBP11.93□□□□□ -0.5
PTCH1-209ENST00000437951 STIP1P31948 543 aaKnown RBP11.93□□□□□ -0.5
PTCH1-209ENST00000437951 AKR1D1P51857 326 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 ARHGDIBP52566 201 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 C5orf22Q49AR2 442 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 CLEC4GQ6UXB4 293 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 EXOC3L1Q86VI1 746 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 BORCS5Q969J3 196 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 OTUD5Q96G74 571 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 LSM1O15116 133 aaKnown RBP11.93□□□□□ -0.5
PTCH1-209ENST00000437951 SERPINB5P36952 375 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 CENPIQ92674 756 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-209ENST00000437951 MOSPD1Q9UJG1 213 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 QARSP47897 775 aaKnown RBP11.93□□□□□ -0.5
PTCH1-209ENST00000437951 CATSPERBQ9H7T0 1116 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 IL1RL2Q9HB29 575 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 C2CD2Q9Y426 696 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 UTYO14607 1347 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 TMEM253P0C7T8 217 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 RARGP13631 454 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 RPL19P84098 196 aaKnown RBP11.93□□□□□ -0.5
PTCH1-209ENST00000437951 TBCELQ5QJ74 424 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 SYTL1Q8IYJ3 562 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 ATG16L2Q8NAA4 619 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 OR6Y1Q8NGX8 325 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 URGCPQ8TCY9 931 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 PPP1R14AQ96A00 147 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 RFT1Q96AA3 541 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 TJP2Q9UDY2 1190 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 POLG2Q9UHN1 485 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 CHP2O43745 196 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 HOXD10P28358 340 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 TYSND1Q2T9J0 566 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 FUT8Q9BYC5 575 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 SPACA6W5XKT8 324 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 XDHP47989 1333 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 UNC13AQ9UPW8 1703 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 PDHBP11177 359 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 COILP38432 576 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-209ENST00000437951 ACADSBP45954 432 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 SLC27A3Q5K4L6 730 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 RBM20Q5T481 1227 aaKnown RBP11.93□□□□□ -0.5
PTCH1-209ENST00000437951 OSBPL6Q9BZF3 934 aa11.93□□□□□ -0.5
PTCH1-209ENST00000437951 DDX20Q9UHI6 824 aaKnown RBP11.93□□□□□ -0.5
PTCH1-209ENST00000437951 ADGRA2Q96PE1 1338 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 DPYSL4O14531 572 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 DGKIO75912 1065 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 CD2BP2O95400 341 aaKnown RBP11.92□□□□□ -0.5
PTCH1-209ENST00000437951 PADI6Q6TGC4 694 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 NET1Q7Z628 596 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-209ENST00000437951 SSNA1O43805 119 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 ATG7O95352 703 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 CYP2D6P10635 497 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 RPS7P62081 194 aaKnown RBP11.92□□□□□ -0.5
PTCH1-209ENST00000437951 TRAF2Q12933 501 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 PDPK2PQ6A1A2 396 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 TYW3Q6IPR3 259 aaKnown RBP11.92□□□□□ -0.5
PTCH1-209ENST00000437951 EXD1Q8NHP7 514 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 STARD8Q92502 1023 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 DDX17Q92841 729 aaKnown RBP11.92□□□□□ -0.5
PTCH1-209ENST00000437951 TMEM120AQ9BXJ8 343 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 GANQ9H2C0 597 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 A0A0B4J269 797 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 LINC00854A0A1B0GVQ3 168 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 MAPK7Q13164 816 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 TUBB3Q13509 450 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 ZNF568Q3ZCX4 644 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 BROXQ5VW32 411 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 SYTL5Q8TDW5 730 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-209ENST00000437951 DUSP12Q9UNI6 340 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 ZBTB39O15060 712 aa11.92□□□□□ -0.5
PTCH1-209ENST00000437951 CLOCKO15516 846 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms